Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 309 a.a., LysR family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  236 bits (603), Expect = 4e-67
 Identities = 133/299 (44%), Positives = 186/299 (62%), Gaps = 3/299 (1%)

Query: 5   RFGDIAAFVSAAKAGSFTAAAASLGLTRSAVGKSIARLEARMAVRLLNRTTRKLSLTDEG 64
           RF  I AFV  A+ GSF+ AA  LGL++S + + ++ LEA + VRLL+RTTR LS T+ G
Sbjct: 4   RFDTIIAFVRVAETGSFSEAARRLGLSKSMISRQVSALEADLGVRLLHRTTRSLSPTEAG 63

Query: 65  LVAFERWRQILDDLDEVESTMALRRGKPTGTLRLTAPLSLGQRHVLPVLDQYLKQWPELR 124
               ER ++IL DLDE    ++  +  P G LR++APLS G  H+   L  +L+++PE+ 
Sbjct: 64  RAYLERCQRILADLDEANLLVSHLQAVPRGRLRVSAPLSFGIGHLSACLPGFLERYPEIE 123

Query: 125 ADIRFTDRFVDLVEEGVDVAVRIGAPKEDSQLLTRTVAWQQFVTCASPAYLEKRGVPQIP 184
            ++ FTDR VDLVEEG D+AVRIG    DS L+ R +A  + +  ASPAYLE+RG P+ P
Sbjct: 124 LEMGFTDRHVDLVEEGWDLAVRIGR-LADSSLIVRRLAPVRRMAAASPAYLERRGTPRRP 182

Query: 185 GDLYGHDKITFLAGEKAMPWRFHTEAGLHL-CEDPGRLNIDSSEAMLDGARAGFGLIHLP 243
            +L  HD +T   G     WRF  + G  +  E  GR + D+ + + D A AG G++ LP
Sbjct: 183 EELSAHDCLTH-GGRVQSEWRFTGDDGKPVQVEVRGRFHADNGDVLRDMALAGLGVVLLP 241

Query: 244 TYITGDDLRAGNLVEVLHAYRPPADPIRIVYPSKRHLSPRVRGFIDLLVATWEPGVPWE 302
           ++  GDD+RAG LV +L AY P    +  VYP  RHLSP+VR F+D L  ++ P   W+
Sbjct: 242 SFFLGDDIRAGRLVPLLEAYVPLDSSLNAVYPHGRHLSPKVRAFVDHLATSFGPEPYWD 300