Pairwise Alignments

Query, 318 a.a., BenABC operon transcriptional activator from Pseudomonas putida KT2440

Subject, 345 a.a., Putative transcriptional regulatory protein from Variovorax sp. SCN45

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 87/334 (26%), Positives = 137/334 (41%), Gaps = 24/334 (7%)

Query: 4   RLLSERSSVFHHADPYAVSDYVNQHVGQHCIGLSRTTHPQASLSH--RKFAELDLCRISY 61
           RL  +R  +F   D     + V +    H + + R      +  H  R   ++ L  + Y
Sbjct: 9   RLPLQRYRLFESHDVDEARESVARVFCPHGLNMLRPRTELDACHHSARLHRDVSLNYVQY 68

Query: 62  GGSVRVTSPALETIYHLQVLLNGNCLWRGHKREQHLVPGELLLINPDDPVDLTYSEDCEK 121
           G  V++    L+  + LQ+ L G    R   ++    P    L +P +P+ + +++D   
Sbjct: 69  GPGVQIEPGYLQDFFLLQIPLRGGADIRCGAQQVDATPSLASLPSPTEPLSMRWADDSPH 128

Query: 122 FILKVPTRLLDSICDEQRWQRPDGGVRFLRNHYRLDE-----LDGFVNLLAMVCHEAE-V 175
            I+++    L S   E   Q P            LD      L  F++ L +       +
Sbjct: 129 LIVRLARPALQSRL-EALLQAPVRQALVFELGVPLDNPALAPLVHFIDYLRLTLDAGNAL 187

Query: 176 SDSLPRVQGHYSQIVASKLLTLMSTNIRRESLSAPQAGL-----ERILDYIERNLKLELS 230
                R+  H    + S LL     N         Q GL      R  +++  + +  +S
Sbjct: 188 QTGGNRLAEHAEGYLMSSLLMSARHNHSGALAGDAQRGLMPRVVRRAQEFMSAHAEQPVS 247

Query: 231 -AEVLAEQACMSLRSLYALFDQHLGITPKHYVRQRKLERVHA-----CLSDPTCGVRSVT 284
            A+V  E  C S R+L   F QH G  P  ++R+ +L++V A      LSD   GVR   
Sbjct: 248 LADVCREVGC-SARALQLAFRQHAGQGPMEFLRELRLDKVRADLLAAALSDDGGGVRETA 306

Query: 285 ELALDYGFLHLGRFSEIYRQQFGELPSQTFKRRA 318
           E    YGFLHLG F+  YR +FGE PS+T    A
Sbjct: 307 E---KYGFLHLGHFAAQYRARFGERPSETLAHGA 337