Pairwise Alignments

Query, 318 a.a., BenABC operon transcriptional activator from Pseudomonas putida KT2440

Subject, 320 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 59.7 bits (143), Expect = 9e-14
 Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 16/294 (5%)

Query: 26  NQHVGQHC--IGLSRTTHPQASLSHRKFAELDLCRISYGGSVRVTSP-----ALETIYHL 78
           N +V   C  +  S T + + S+       LD+  ++ G    + +P     + +  + +
Sbjct: 25  NVYVQLECDAVQQSGTGNFEGSIRQHTLPSLDMSVVTSGPQKVMRTPGHIAHSSDDYFLV 84

Query: 79  QVLLNGNCLWRGHKREQHLVPGELLLINPDDPVDLTYSEDCEKFILKVP-TRLLDSICDE 137
            +   G  + R   R+  L  G+  L +   P +L + E  E+ +LK+P  RL   + D 
Sbjct: 85  SIQARGQGVVRQDGRDAVLSAGDFALYDSTRPYELLFEESFEQIVLKLPGDRLRGELRDT 144

Query: 138 QRWQRPDGGVRFLRNHYRLDELDGFVNLLAMVCHEAEVSDSLPRVQGHYSQIVASKLLTL 197
           +         R    H  L    G +  L       + + +L    G  S +VA      
Sbjct: 145 EALTATTVSGREGAGHLLL----GMIRTLREDIDTLQPASALAVAHGVQSILVAGLQTLP 200

Query: 198 MSTNIRRESLSAPQ-AGLERILDYIERNLKLELSAEVLAEQACMSLRSLYALFDQHLGIT 256
            +      +L+A   A ++R++D  E+     LS   LA Q  +S+  ++ +F     +T
Sbjct: 201 AARAPALSNLTAYHLARVKRLID--EQLADPMLSVGTLAAQLGVSVSHIHRVFKSE-PLT 257

Query: 257 PKHYVRQRKLERVHACLSDPTCGVRSVTELALDYGFLHLGRFSEIYRQQFGELP 310
           P  Y+ +R+LE     L +P    R V E+A   GF     FS  +R++FG  P
Sbjct: 258 PSQYIWERRLEACSRDLLEPRLAGRPVAEIAYGRGFNDAAHFSRAFRERFGCSP 311