Pairwise Alignments

Query, 318 a.a., BenABC operon transcriptional activator from Pseudomonas putida KT2440

Subject, 311 a.a., Transcriptional activator NphR from Pseudomonas lactucae CFBP13502

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 82/316 (25%), Positives = 135/316 (42%), Gaps = 46/316 (14%)

Query: 23  DYVNQHVGQHCIGLSRTTHPQAS----LSHRKFAELDLCRISYGGSVRVTSPALETIYHL 78
           DY  + V +HC+        Q+S    L+     +LDLC +S        SP        
Sbjct: 19  DYWKEVVCRHCLAADSKPLSQSSFDGALAVNTVGDLDLCSLS--------SPLHYWERSE 70

Query: 79  QVLLNGNC--LWRGHKREQH-----------LVPGELLLINPDDPVDLTYSEDCEKFILK 125
           + L +G    LW G  R+ H           L  G L L +       ++    E  +++
Sbjct: 71  RHLRSGPAEDLWLGFARKGHGQIEQGSRKANLAAGNLFLYDATQAFRFSFG-GTENHLVR 129

Query: 126 VPTRLLDSICDEQRWQRPDGGVRFLRNHYRLDELDGFVNLLAMVCHEAEVSDSLPRVQGH 185
           +P  LL      +R  R       + +    D   G + L  M+   A    SL     H
Sbjct: 130 IPRALLT-----ERLPRIAEYTAMVLD----DRRPGVIPLREMLRQAASTPASLQ--DEH 178

Query: 186 YSQIVASKLLTLMSTNIRRESLSAPQAGLE---RILDYIERNL-KLELSAEVLAEQACMS 241
            ++  ++ LL L+  ++  + L+     L+   RI+ YI+R+L + +LS EV+A+   +S
Sbjct: 179 IAKRYSAALLDLLVLSLELQDLNTTHQELDLYGRIMKYIQRHLTEPDLSIEVIAQAHNVS 238

Query: 242 LRSLYALFDQHLGITPKHYVRQRKLERVHACLSDPTCG-VRSVTELALDYGFLHLGRFSE 300
            R++   F ++     K  V Q   ER++A       G VRSV++ ALD+GF     FS 
Sbjct: 239 TRTVTRAFARY----QKTPVAQIWKERLNASREAIERGQVRSVSQAALDFGFSDFSHFSH 294

Query: 301 IYRQQFGELPSQTFKR 316
            +R+ FG  P+   +R
Sbjct: 295 AFRKAFGVAPNTLLRR 310