Pairwise Alignments

Query, 296 a.a., Universal stress protein family from Pseudomonas putida KT2440

Subject, 300 a.a., universal stress protein UspA from Pseudomonas simiae WCS417

 Score =  150 bits (379), Expect = 3e-41
 Identities = 98/300 (32%), Positives = 149/300 (49%), Gaps = 10/300 (3%)

Query: 1   MSQFKRLFVMLGPQMRHTPALQRAAALAESSGALLDINVF--VDDVDTFGLMSDG---RE 55
           M + KR+ +++  +M  TPA  RA ALA ++GA L +  F  V  +   GL       R 
Sbjct: 1   MQKLKRILLIVPTEMTRTPAFDRAQALACATGASLHMVAFDYVQALAVAGLFDHEAMTRA 60

Query: 56  RERLLSDNRQWLADEAEQLSDAGVDVSTELLLTRDPLGSVLERVERLGCDLLVKDVQHEP 115
           RE  L  +R WL  +A     AG  V++E++  +   G VL+ V     DL+VKD+ H P
Sbjct: 61  REGYLQVHRHWLEQQARF---AGGQVTSEVVWAKASPGHVLDYVNDFHADLVVKDIHHVP 117

Query: 116 VLKRLLVTPLDWQLLKDSPVAVHLVSDIRLPLPRQIAATVDLNS-HGAGEHLDEQVIHCA 174
            L R    PLDW+LL++     HLV++ R P P +I   +DL+      + ++EQV+  A
Sbjct: 118 ALGRAFHQPLDWRLLRECEAHFHLVTEARHPNPLKILVAIDLSHLEELTQGVNEQVLELA 177

Query: 175 HDLALQCNAELHLLHVCDAAKTHIADFGAGTVTM-PGFDSSVRTAQRAAFNRLGDHHQIP 233
             LA  C A LHLL + + +          T+++      +V  AQ  AF  L   + I 
Sbjct: 178 STLAASCGARLHLLSISNWSVVGDTSTSVSTLSLNESLRDAVNDAQEEAFEVLASRYGID 237

Query: 234 LERRHFLEGAAIRAIAQFVGHNRVDVIVMGSHRHDAMQTFLGGTTAHVLEHPLCNVLAIK 293
             RRH L G     I +F   N  D++V+G+        F+G T   +L HP C++L ++
Sbjct: 238 GHRRHLLTGIPHAVIERFAQQNEFDIVVLGASHARGGDMFIGSTAERLLNHPPCSLLVVQ 297