Pairwise Alignments

Query, 288 a.a., putative DNA-binding transcriptional regulator, LysR-type from Pseudomonas putida KT2440

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 78/291 (26%), Positives = 126/291 (43%), Gaps = 13/291 (4%)

Query: 1   MDLVQLEIFKAVAEQGSISAAAQHIHRVPSNLTTRIKQLEEDLGVELFIREKSRLRLSPA 60
           MDL  L  F A+AE GS S A + +H     ++ RI  LE+ L V LF R    + L+ A
Sbjct: 1   MDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLKVRLFDRLGREVGLTEA 60

Query: 61  GWNFLEYTRRILDLVHEAR--LTVAGEDPQGTFALGSLESTAAVRIPALLAAYNQRYPKV 118
           G   L    +IL+++ + R  LT    +  G   L +       R+P +L  + + YP V
Sbjct: 61  GRALLPRAYQILNVLDDTRRALTNLTGEVSGRLTLATSHHIGLHRLPPVLRTFTREYPNV 120

Query: 119 DLDLSTGPSGTMLEGVLSGRL-VAAFVDGPVLHPTLEGIPVFEEEMMVIAPLNHTPVTRA 177
            LD+    S    E +L GR  VA     P  H  +   PV+++ +  +    H+ ++  
Sbjct: 121 ALDIQFLDSEVAYEEILHGRAEVAVITLAPDPHNLVRATPVWDDPLDFVVAPEHSLISNG 180

Query: 178 Q----DVNGESIYAFRANCSYRHHFENWFVQDQAVPGKIHEMESY-HGMLACVSAGAGLA 232
                D+ G     F    ++ HH  +   + Q +   I    +Y   +   VS G   +
Sbjct: 181 SVSLADIAGHPA-VFPGGNTFTHHIVSRLFEAQGLTPNIAMSTNYLETIKMMVSIGLAWS 239

Query: 233 MLPRSMLDNMPGCSTVSAWPMSEDFRYLKTWLVWRRGTVSRSLSMFVKLLE 283
           +LPR+MLD       +    +S    Y    +V    T+S +   F+ LL+
Sbjct: 240 VLPRTMLDEQVASIALPGIQLSRQLGY----IVHTERTLSNAARAFMSLLD 286