Pairwise Alignments

Query, 349 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 313 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  108 bits (271), Expect = 1e-28
 Identities = 84/297 (28%), Positives = 136/297 (45%), Gaps = 22/297 (7%)

Query: 66  DVTEQVRATPGWQQQYRQMSPGYFSGELRCLGLDGVEVYEERLNTRVEQFFRAPSGSLAF 125
           DV EQ +A  GW Q YRQ+ PG F G L+ +   G+ V+ E  N R+ Q    P  +L  
Sbjct: 16  DVWEQEKALVGWTQHYRQLQPGRFLGRLKEVVAPGISVFREDTNLRLHQHTAPPPDTLVV 75

Query: 126 CFDR-------------SENSLYLLNEQSRNIWITPENYQEVAVVFDQAFLARHGLD-PQ 171
                             EN + LL   + + ++       +A+  D+    +  +  P 
Sbjct: 76  AVPLPGSAPARLDGRPVGENEVLLLRGGTLSEFLCNGPMSVLALAIDRRRAEQLRVTVPD 135

Query: 172 RLEGLFMVPLGSGQNALFGSWLSATLTRLGEEGCPLQGQALAEQLLEDCLFILD-NASQR 230
             E    VP  S   A  G   +     L      L+   +   LL+ C+ +++    Q 
Sbjct: 136 AAE----VPASSFSYARAGELRAVLQCVLAASPVLLEQSEVFLPLLDQCVSVVEAGIMQA 191

Query: 231 LQGVALGRRDEERAIMHRVSEWAADCPEETLNLLELADVAGVSLRQLQQAFKAFTGMPPA 290
           ++   +G    ++  + +  +     P++ L++ ++A   GV+ R L+ +F    G+ P 
Sbjct: 192 VRPPTVGHSQRQK-FVRQFRDHVEAHPDDRLSVAQVAQAIGVTTRMLEYSFADVMGISPK 250

Query: 291 HWLRLRRLNGARRDLLRGG--GVTVAEVAMRWSFWHLGRFSESYRQLFKEFPSETLK 345
            +L++ RLN ARR L       VTVAE+AM   FWHLGRFS  Y ++F E PS+TL+
Sbjct: 251 DYLKMVRLNAARRALRVADPRTVTVAEIAMDHGFWHLGRFSAYYSEMFGEKPSDTLR 307