Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  398 bits (1023), Expect = e-115
 Identities = 190/335 (56%), Positives = 251/335 (74%)

Query: 28  VYNWTDYIGDTTLADFQASSGIKVVYDVFDSNETLEGKLLAGRTGYDVVVPSNHFLARQA 87
           VYNW+DYI   T+A+F+  SGIKVVYDVFDSNETLE KLLAG++GYD+VVPSN+FLA+Q 
Sbjct: 30  VYNWSDYIAPDTIANFEKESGIKVVYDVFDSNETLEAKLLAGKSGYDIVVPSNNFLAKQI 89

Query: 88  QAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPGNQYAVPYLWGTNGIGYNVDKVKAALGV 147
           +AG +  LD+SKL N+ +L+  LLK +  +DP N++A PY+WG+ GIGYN +KVKAALGV
Sbjct: 90  KAGVYQELDKSKLSNYDNLNKSLLKAVSVSDPDNKHAFPYMWGSIGIGYNPEKVKAALGV 149

Query: 148 DHIDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAVLNYLGMDPRSEKPGDYAKAEARLL 207
           D IDSW VL +PEN+ KLK CGV+F+DSP E+ P  L+YLG+   ++K  D  +AE   L
Sbjct: 150 DKIDSWDVLLKPENIAKLKSCGVSFLDSPTEMLPVALHYLGLPTDTQKKADLKQAEDLFL 209

Query: 208 ELRPYITYFHSSKYVSDLANGDVCIAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNL 267
           ++RP I YFHSSKY+SDLANG++C+A GYSGD+ QA +RA EA   VKVAY IPKEG+  
Sbjct: 210 KIRPSIGYFHSSKYISDLANGNICVAVGYSGDIEQAKSRAAEAGGKVKVAYDIPKEGAGS 269

Query: 268 WFDLLAIPKDANNPEQALAFINYLLDPKVIAKVSATVGYANANPDAKAYMDASLVNNPEI 327
           +FD++AIPKDA N + A  F+NYLL P+V+A+++ +V + N N  A A +D  + ++P I
Sbjct: 270 FFDMVAIPKDAENVDAAYKFMNYLLKPQVMAEITNSVHFPNGNEKATALVDKEITSDPGI 329

Query: 328 YPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKSNR 362
           YPP +V  KLY  +       R MTRSW+KIKS +
Sbjct: 330 YPPADVQAKLYAIADLPAATQREMTRSWTKIKSGK 364