Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 364 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  501 bits (1291), Expect = e-147
 Identities = 239/356 (67%), Positives = 289/356 (81%), Gaps = 2/356 (0%)

Query: 7   LIPAAFTLLFATTTQAAPTVSVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNETLEGKL 66
           L+ A  TL  +   QAAPTV +YNW+DYIG  TLA+F+ +SGIK VYDVFDSNETLEGKL
Sbjct: 11  LVGAGITLTLSV--QAAPTVHIYNWSDYIGTDTLANFEKASGIKPVYDVFDSNETLEGKL 68

Query: 67  LAGRTGYDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPGNQYAVP 126
           LAGRTGYDVVVPSNHFL +Q +AGAF  LD+S L N+ +LDP LLK+LE+NDPGNQYAVP
Sbjct: 69  LAGRTGYDVVVPSNHFLGKQIKAGAFQKLDKSLLTNYANLDPALLKRLEKNDPGNQYAVP 128

Query: 127 YLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAVLNY 186
           YLWGTNGIGYN DK K  LGVDHIDSWAVLFEPEN+KKL  CGV+FMDS DE+ PAVLNY
Sbjct: 129 YLWGTNGIGYNGDKGKEVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSADEMLPAVLNY 188

Query: 187 LGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGDVFQAANR 246
           +G++P S  P DY KAE +LL++RPY+TYFHSSKY+SDLANG++C+A G+SGDVFQA  R
Sbjct: 189 MGLNPNSTNPDDYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKAR 248

Query: 247 AVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKVSATVGY 306
           A EA  GV +AY+IPKEG NLWFD+LAIPKDA N ++A AFINYLL P+VIA+VS  VGY
Sbjct: 249 AAEAGKGVNIAYTIPKEGGNLWFDVLAIPKDATNVKEAHAFINYLLQPEVIAQVSDYVGY 308

Query: 307 ANANPDAKAYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKSNR 362
           AN NP A   M+ S+  +  +YPPQ VLD+ +++    PK+ R+MTRSW+K+K+ +
Sbjct: 309 ANPNPGADKLMEQSIRTDEAVYPPQAVLDRTFVNFELPPKVQRLMTRSWTKVKTGK 364