Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  419 bits (1078), Expect = e-122
 Identities = 208/364 (57%), Positives = 260/364 (71%), Gaps = 4/364 (1%)

Query: 1   MRHLQALIPAAFTLLFATTTQAAP---TVSVYNWTDYIGDTTLADFQASSGIKVVYDVFD 57
           +R  + L P     LFA    A     T+ VYNW DYI   TL  FQ  SG+K+VYD+FD
Sbjct: 2   VRLKRLLAPFIAATLFAGALHAQAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFD 61

Query: 58  SNETLEGKLLAGRTGYDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQN 117
           +NE LE KLL G +GYDVVVPSN FLA+Q +AG F PLDRSKLPNWQHLDP L+K +E N
Sbjct: 62  TNEALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEAN 121

Query: 118 DPGNQYAVPYLWGTNGIGYNVDKVKAALGVDH-IDSWAVLFEPENLKKLKQCGVAFMDSP 176
           DPGN++AVPY++GT  IG+N  KVKAALG +  +DSW ++F+ EN+ KLKQCGVA +DSP
Sbjct: 122 DPGNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSP 181

Query: 177 DELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGY 236
            E+ P  L YLG+ P S+KP DY KAE  +L++RP+ITYFHSSKY++D+ANGD+C+A GY
Sbjct: 182 SEILPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGY 241

Query: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKV 296
           SG   QAANRA EA NGV V   +PKEG+ +WFD+LAIPK A NPE A  FINYLL P+V
Sbjct: 242 SGSFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEV 301

Query: 297 IAKVSATVGYANANPDAKAYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWS 356
           IA +S  VGY N N DA   ++ ++ NNP +YP  E + KLY     +    R  TR+W+
Sbjct: 302 IAPISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWT 361

Query: 357 KIKS 360
           +IKS
Sbjct: 362 RIKS 365