Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score =  399 bits (1025), Expect = e-116
 Identities = 192/360 (53%), Positives = 263/360 (73%), Gaps = 2/360 (0%)

Query: 5   QALIPAAFTLLFATTTQAAPTV-SVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNETLE 63
           + L+ AA     A+  QA   V +VYNW+DYI   T+A F+  +GIKV YDVFDSNETLE
Sbjct: 6   KTLLAAALMGAMASAVQAEDKVLNVYNWSDYIAPDTIAKFEKQTGIKVKYDVFDSNETLE 65

Query: 64  GKLLAGRTGYDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQL-EQNDPGNQ 122
            KLLAG++GYD+VVPSN+FLA+Q +AG +  LDRSKLPNW++LDP LLK + + +D  N+
Sbjct: 66  AKLLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDASDKDNK 125

Query: 123 YAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSPDELFPA 182
           +A PY+WG+ GIGYN +KVKAALGVD IDSW V+F+PEN+ KLK CGV+F+D+P E+ PA
Sbjct: 126 HAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPTEMLPA 185

Query: 183 VLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGDVFQ 242
            L+YLG    S K  D   AE   L++RP ITYFHSSKY+ D+ANG++C+A GYSGD+ Q
Sbjct: 186 ALHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYSGDLEQ 245

Query: 243 AANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKVSA 302
           +  RA EA + VKV Y IPKEG+  ++D++AIPKDA + + A  F+N+L+ P+++A+++ 
Sbjct: 246 SKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPEIMAEITN 305

Query: 303 TVGYANANPDAKAYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKSNR 362
            V + N N  A  ++D  + ++P IYPP EV  +LY  + P   + RV+TRSW+KIKS +
Sbjct: 306 AVRFPNGNAAATPFVDKDITSDPSIYPPAEVKKQLYAIAAPDASVQRVITRSWTKIKSGK 365