Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 364 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score =  518 bits (1334), Expect = e-152
 Identities = 245/349 (70%), Positives = 294/349 (84%)

Query: 14  LLFATTTQAAPTVSVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNETLEGKLLAGRTGY 73
           L  A + QAAPTV  YNW+DYIG TTLADF+ ++GIK V DVFDSNETLEGKLLAG TGY
Sbjct: 16  LTLACSVQAAPTVHFYNWSDYIGPTTLADFEKATGIKPVQDVFDSNETLEGKLLAGNTGY 75

Query: 74  DVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPGNQYAVPYLWGTNG 133
           DVVVPSNHFL +Q +AGAF  LD++ LPN+ +LDP L+K+LE+NDPGNQYAVPYLWGTNG
Sbjct: 76  DVVVPSNHFLGKQIKAGAFQKLDKNLLPNYSNLDPALMKRLEKNDPGNQYAVPYLWGTNG 135

Query: 134 IGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAVLNYLGMDPRS 193
           IGYNVDKVKAALGVD IDSWAVLFEPEN+KKL +CGVAF+DS DE+ PAVLNY+G++P S
Sbjct: 136 IGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAVLNYMGLNPNS 195

Query: 194 EKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGDVFQAANRAVEAKNG 253
             P DYAKAE +LL +RPY+TYFHSSKY++DLANGD+C+A G+SGDVFQA  RA EAK G
Sbjct: 196 TDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKG 255

Query: 254 VKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKVSATVGYANANPDA 313
           V +AY+IPKEG NLWFD+LAIPKDA N ++A AFINYLL P+VIA+VS  VGYAN NP A
Sbjct: 256 VNLAYAIPKEGGNLWFDVLAIPKDAKNVKEAHAFINYLLKPEVIAQVSDYVGYANPNPKA 315

Query: 314 KAYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKSNR 362
            A MD ++  +  +YPPQEVLDK++++S   PK+ R+MTRSW+K+KS +
Sbjct: 316 GALMDQAVRTDAAVYPPQEVLDKMFVNSELPPKVQRLMTRSWTKVKSGK 364