Pairwise Alignments

Query, 301 a.a., transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., HTH-type transcriptional regulator CynR from Xanthobacter sp. DMC5

 Score =  114 bits (285), Expect = 3e-30
 Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 1/287 (0%)

Query: 1   MNVKQLRAFVAVAKYQSFAQAGEHLHVSQPALSLTIKALEENLGGALLSRTTRSVSLTAE 60
           M ++ LRAFV V +   F+ A + L+ +QP +S  +K LE+ LG  LL R      LTA 
Sbjct: 1   MELRTLRAFVEVVRQGGFSPAAKVLNATQPTVSKAVKQLEDELGVPLLDRIGHRSQLTAA 60

Query: 61  GEVLLPLARRLLADWDDTEEMLRQRFTLQLGRVSVAAMPAFAGNLLPHSLKVFRQRYPKV 120
           GE++   A  LLA+ +     L     L+ G + +   P  A  L      VFR RYP +
Sbjct: 61  GEIVYRRALTLLAEREGLVAELEDLRGLRRGSLRLGLPPLGASTLFAPLFAVFRSRYPGI 120

Query: 121 NVTVHDVINEQVQELVRHRRVELGIGFEPDNIDGLDFHPLYMDRFVAVVAADSPLALLPQ 180
            + + +  +++++E++    VEL     P   DG D   +  +  +AV+    PLA   +
Sbjct: 121 EIRLTEHGSKRLEEMLLEGEVELAGSLLPAK-DGFDGQAVRCEPLMAVLPVSHPLAGRER 179

Query: 181 VSWAQLMAEDFVALQRPSAVRLLMEQNVAARHGKLAVAFESHQLTTIGRMVASGLGVSAV 240
           V+ A L    F+  +   A+  ++E   A       VA  S Q+  I  +  +GLGV+ +
Sbjct: 180 VTIADLADFPFILFEGGFALNQVLEDACARNGFSPQVAARSGQIDFIVEIAGAGLGVAFL 239

Query: 241 PALCINQMQELGARCVTLVEPTVERRIGVIALSEHKLSTAAQALLEV 287
           P     Q +    R   L EP  E  + ++      LS AA+A LE+
Sbjct: 240 PKTIAYQRRTPAVRLSELAEPGTEWHMAIVWRKGSYLSHAARAWLEL 286