Pairwise Alignments

Query, 301 a.a., transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  114 bits (286), Expect = 2e-30
 Identities = 92/293 (31%), Positives = 148/293 (50%), Gaps = 7/293 (2%)

Query: 1   MNVKQLRAFVAVAKYQSFAQAGEHLHVSQPALSLTIKALEENLGGALLSRTTRSVSLTAE 60
           M ++ LR F+AVA+   F +A + L +SQP LS  I+ALE+ LG  L  RT R V L+  
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60

Query: 61  GEVLLPLARRLLADWDDTEEMLRQRFTLQLGRVSVA-AMPAFAGNLLPHSLKVFRQRYPK 119
           G + L  AR++LA  +   ++ R+    +LG + +     A   + +P ++  FRQR+P 
Sbjct: 61  GRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPA 120

Query: 120 VNVTVHDVINEQVQELVRHRRVELGIGFEPDNIDGLDFHPLYMDRFVAVVAADSPLALLP 179
           V++ + ++ +  V E V    +E+G+       +GL    L+ +  VAV+ A  PLA   
Sbjct: 121 VHLNLKEMSSRDVAEGVFDESIEVGLMRPMPLPEGLVATELFREPLVAVINASHPLAEGT 180

Query: 180 Q--VSWAQLMAEDFVALQRPSAVRLLMEQNVAARHGKLAVAF--ESHQLTTIGRMVASGL 235
           +  V  A L  E FV   R     L  +    ARH   +  F  E+ +  TI  +V++GL
Sbjct: 181 EQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSAGL 240

Query: 236 GVSAVPALCINQMQELGARCVTLVEPTVERRIGVIALSEHKLSTAAQALLEVL 288
           GVS +PA    +M+  G    TL++      + ++   E   S  A+A  E+L
Sbjct: 241 GVSVLPA-SFQRMRIEGVVYRTLLDEEAMTAVWLVQ-RERGHSVMAKAFAELL 291