Pairwise Alignments

Query, 1033 a.a., error-prone DNA polymerase from Pseudomonas putida KT2440

Subject, 1207 a.a., DNA polymerase III subunit alpha from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  309 bits (792), Expect = 7e-88
 Identities = 279/1091 (25%), Positives = 469/1091 (42%), Gaps = 154/1091 (14%)

Query: 11   PGYAELHCLSNFSFQRGASSADELFRRAREQGYQALAITDECTLAGIVRAWQAAKVHQLR 70
            P ++ LH  + +S   G +S   L ++A+  G  A+A+TD   +         A  + ++
Sbjct: 2    PVFSHLHTHTQYSLLDGQASISALMKKAQADGMPAVAMTDHGNMFAAFNFVAEANKYNVK 61

Query: 71   LIVGSEVQLCDGPKL--------------VLLVENLTGYQNLCALITRARRRAEKGAYQL 116
             IVG E  L     L              +LL ++  GYQNL  L + +        +  
Sbjct: 62   PIVGCEFYLVKDRHLKTFSKEVKDVRHHQLLLAKDQEGYQNLAKLCSLSYIEGVYSKWPR 121

Query: 117  FRDDLLLHH-QGLLA-------------LWVAADSGDTATGAWLRSVFAERLWLAVHLH- 161
               +LLL + +GL+A             LW + +  +     WL  VF E  ++ +  H 
Sbjct: 122  IDKELLLKYSKGLIATSCCIGAEVPQAILWKSEEEAEEIFKWWL-DVFGEDYYIEIQRHG 180

Query: 162  ------RGSDDAVRLQRLRALAADVGIRAVACGDVHM----------------------- 192
                   G       Q L   A    ++ +   D H                        
Sbjct: 181  LQNIDGTGKSQEDINQVLLKWAKKYNVKVICTNDSHYVDQEDWNAHDILLCVNTGEDQST 240

Query: 193  ----------------------HVRGRRALQDCMTAIRQHC-QVSEAG---RFLFANGER 226
                                   V   R+     + +RQ   ++ EAG   RF F N + 
Sbjct: 241  PVGDFQTKYYRFLSDDQKVIYDTVENVRSKYSNHSTVRQMLNRIDEAGPKTRFGFPNDQF 300

Query: 227  HLRSQAQLAELYP-----LDLLAETL--VIARRCQFDLSELNYQYPRELVPEGHTPASWL 279
            + ++QA++ EL+      +D   E +  +   + + D+   N+  P    PE   P ++L
Sbjct: 301  YFKTQAEMNELFKDVPEAVDNTNEIVDKITPPKLKRDILLPNFPIP----PEHAGPDAFL 356

Query: 280  RELCEQGMPLRWPDGPSGKVRDVLAKELGLIEELGYESYFLTVHDIVAFARSQRILC-QG 338
            R L  +G   R+ D  +  V + L  EL +IE +G+  YFL V D +   R   +    G
Sbjct: 357  RHLTYEGAKKRYTD-ITPDVEERLDYELRIIETMGFAGYFLIVQDFINRGRDMGVFVGPG 415

Query: 339  RGSAANSVVCFVLGITELDPMKHHLLFERFLSRERNEPPDIDVDFEHDRREEVIQYVFRR 398
            RGSAA S V + +GIT +DP+K++LLFERFL+ ER   PDID+DF+   R+ VI YV  +
Sbjct: 416  RGSAAGSAVAYCIGITNIDPIKYNLLFERFLNPERVSMPDIDIDFDDVNRQRVIDYVVDK 475

Query: 399  YGRHRAALTAVVNTYHAAGAVRDVARALGLPADQVDALAKCCGRWSDRIPDD-------- 450
            YG+ + A      T  A  +++DVAR+  LP  + + LAK        +PD         
Sbjct: 476  YGKTQVAQIITFGTMAAKSSIKDVARSTSLPLAEANELAK-------MVPDTPGTTLAKA 528

Query: 451  --QRLAEAGFEAGSPSLRRVLVLAGELIGFPRHLSQHPGGFVISQQPLDQLVPVENAAMP 508
              + L  A    G+     VL LA +L G  R+   H  G +I+   +   +PV  +   
Sbjct: 529  FMENLDLAAIREGTDHRAAVLKLAEKLEGSVRNTGIHAAGVIIAPDDITNYIPVSTSKDA 588

Query: 509  ERTVIQWDKDDLDMVGLLKVDVLALGMLSALRRCFDQLQHHRGRHLTLATIPSEDPATYA 568
            +  V Q+D   ++  G+LK+D L L  L+ ++   + ++ + G  + +  IP +D  TY 
Sbjct: 589  DLLVTQFDGKVIESAGMLKMDFLGLKTLTIIKDALELIKKNHGVEIDIDEIPIDDEKTYQ 648

Query: 569  MISRAETMGVFQIESRAQMAMLPRLRPQKFYDLVIEVAIVRPGPIQGDMVHPYLRRRLKQ 628
            +  R +T+G FQ ES      L  L+P    DL+   A+ RPGP+Q   +  ++ R+  +
Sbjct: 649  LYQRGDTIGTFQFESEGMRMYLKDLQPTNIEDLIAMNALYRPGPMQ--FIPNFINRKHGR 706

Query: 629  EPVTYPSPQLKEVFERTLGVPLFQEQVMELAMVAADYTPGEADQLRRSMAAWKRHGGLEP 688
            E V YP   L+ +   + G+ ++QEQ+M+ A + A Y+ G AD LRR+M   K    +  
Sbjct: 707  EDVEYPHELLEPILNYSYGIMVYQEQIMQTAQILAGYSLGGADLLRRAMGK-KDMKKMAE 765

Query: 689  HRERLVQGMLR-NGYTLAFAERIFEQIKGFGSYGFPESHAASFALLCYASSWLKCHEPAI 747
             RE+ + G    +      A  +F+ ++ F  YGF  SH+A+++++ Y + +LK H PA 
Sbjct: 766  EREKFIAGAAEIHKIPSKKASEVFDVMEKFAQYGFNRSHSAAYSVVAYQTGYLKAHYPAE 825

Query: 748  FTCALVNSWPMGFYSPDQLLQEARRQGIEVRPVDVCHSDWDCTLEPDAEGTLAIRMGLRL 807
            +  A++ +           ++EAR+QG+ V   DV  S     L+ +      IR GL  
Sbjct: 826  YMAAVLTNNMNDIKKVTFFIEEARKQGVAVLGPDVNES----LLKFNVNEQGQIRFGLAA 881

Query: 808  VRGLAEADAKR-VQQARSQRPWRNVEDLCLRAGLDA----------------------RA 844
            ++G  E+     + +  +   ++++ D   R  L A                      RA
Sbjct: 882  IKGTGESAVDAIISEREANGMYQDIFDFSKRVNLRAVNKKTFESMALAGCFDSWELYHRA 941

Query: 845  RARLADGGALRALASD--RHQARWQVAAVQPQLPLFADVQALPEEPVQLPVP---TVGED 899
            +      G   +L     R+   +Q      Q  LF    A+     ++P     T  E 
Sbjct: 942  QLMEVPEGESMSLLEKAVRYGNNYQAEQQAAQQSLFGGSAAVAAPMPKIPEVQPWTQAEM 1001

Query: 900  LMADYQTLGTTLGPHPLALLRARLRALGCRSSSELQGVEHGDNIAVAGLVVGRQRPQTAS 959
            L  + + +G  +  HPL   +  + +    + S ++  ++ D + VAG+V         +
Sbjct: 1002 LRREKEVVGFYMSGHPLDQFKLEIDSYCTCALSNIEEYKNRD-VNVAGMVTDVVIRTAKN 1060

Query: 960  GVTFV--TLED 968
            G  F   T+ED
Sbjct: 1061 GNPFALFTIED 1071