Pairwise Alignments

Query, 1033 a.a., error-prone DNA polymerase from Pseudomonas putida KT2440

Subject, 1154 a.a., DNA polymerase III subunit alpha from Magnetospirillum magneticum AMB-1

 Score =  357 bits (917), Expect = e-102
 Identities = 304/1072 (28%), Positives = 494/1072 (46%), Gaps = 88/1072 (8%)

Query: 11   PGYAE---LHCLSNFSFQRGASSADELFRRAREQGYQALAITDECTLAGIVRAWQAAKVH 67
            P YA+   L   + +S   GA    +L +   +    A+ ITD   L G +    +    
Sbjct: 2    PAYADFVHLRVHTAYSLAEGAIKLKQLIKLCEKAAMPAVGITDTANLFGALEFSTSCSDA 61

Query: 68   QLRLIVGSEVQLC--------DGPK-----LVLLVENLTGYQNLCALITRARRRAEKGAY 114
             ++ IVG+++ +         DG K     LVLL +N  GY NL  L+++A    + G  
Sbjct: 62   GIQPIVGAQIAIRREDGGPSKDGRKPEPDTLVLLCQNEAGYLNLLKLVSKAFLETDAGET 121

Query: 115  -QLFRDDLLLHHQGLLALW---------VAADSGDTATG----AWLRSVFAERLWLAVHL 160
             Q+   DL     GL+ L          + AD G T       A L   FA R ++ +  
Sbjct: 122  PQVTLHDLETRSDGLIVLTGGPAGPVGRLLAD-GQTEKAEIVLARLARAFAGRCYVELMR 180

Query: 161  HRGSDDAVRLQRLRALAADVGIRAVACGDVHMHVRGRRALQDCMTAIRQHCQVSEAGRFL 220
            H    +      L +LA    +  VA  +     RG     D +  I +   +S+  R  
Sbjct: 181  HNLEVEDRIEPLLVSLAYKHDLPLVATNEAFFADRGMYEAHDALVCIAEGAYISQDERRR 240

Query: 221  FANGERHLRSQAQLAELYP--LDLLAETLVIARRCQFDLSELNYQYPRELVPEGHTPASW 278
                E + +S  ++  L+    +    TLVIARRC F +++     P   + +G T A  
Sbjct: 241  LTP-EHYFKSPEEMRALFADLPEACDNTLVIARRCAFGVAKRKPILPPYRM-DGLTEAEV 298

Query: 279  LRELCEQGMPLR-----WPDGPSGKVRDVLAK--------ELGLIEELGYESYFLTVHDI 325
            LR+   +G+  R     + +G +   ++  AK        EL +IEE+G+  YFL V D 
Sbjct: 299  LRKKTWEGLEARLEKHVFKEGMTDDEKEHAAKPYRERIEFELNVIEEMGFPGYFLIVSDF 358

Query: 326  VAFARSQRI-LCQGRGSAANSVVCFVLGITELDPMKHHLLFERFLSRERNEPPDIDVDFE 384
            + ++++Q I +  GRGS A S V + L IT+LDP++  LLFERFL+ ER   PD D+DF 
Sbjct: 359  IQWSKAQEIPVGPGRGSGAGSAVAWALTITDLDPLRWGLLFERFLNPERVSMPDFDIDFC 418

Query: 385  HDRREEVIQYVFRRYGRHRAALTAVVNTYHAAGAVRDVARALGLPADQVDALAKCCGRWS 444
             DRREE I+YV  +YG  + A         A   +RDV R L +P  QVD + K      
Sbjct: 419  QDRREETIRYVQGKYGYSQVAQIITFGKLQARAVLRDVGRVLQMPYGQVDRICKLV---- 474

Query: 445  DRIPDDQRLAEAGFEAG---------SPSLRRVLVLAGELIGFPRHLSQHPGGFVISQQP 495
               P +    E   E+            ++  ++ LA +L G  RH S H  G VI  +P
Sbjct: 475  PNNPANPMTLEQALESEPLLKEQKERDEAVSHLIDLAMKLEGLYRHASTHAAGVVIGDRP 534

Query: 496  LDQLVPVENAAMPERTVIQWDKDDLDMVGLLKVDVLALGMLSALRRCFDQLQHHRGRHLT 555
            LD+LVP+      +  V Q++   ++  GL+K D L L  L+ +      ++  +G  + 
Sbjct: 535  LDELVPLYRDPRSDMPVTQFNMKWVESAGLVKFDFLGLKTLTVMVTAVKHVKKTKGIDID 594

Query: 556  LATIPSEDPATYAMISRAETMGVFQIESRAQMAMLPRLRPQKFYDLVIEVAIVRPGPIQG 615
            L+ IP +D  +Y ++SR +  GVFQ+ES     +L ++ P +  DL+  VA+ RPGP+  
Sbjct: 595  LSAIPLDDAKSYELLSRGDAAGVFQLESSGMRDVLRKMGPNRLEDLIAVVALYRPGPM-- 652

Query: 616  DMVHPYLRRRLKQEPVTYPSPQLKEVFERTLGVPLFQEQVMELAMVAADYTPGEADQLRR 675
            D +  Y+  +  +E   Y  P L+ + + T G+ ++QEQVM++A V + Y+ G AD LRR
Sbjct: 653  DQIPRYIACKHGKEEPDYMHPLLEPILKETFGIMVYQEQVMQIAQVLSGYSLGGADLLRR 712

Query: 676  SMAAWKRHGGLEPHRERLVQGMLRNGYTLAFAERIFEQIKGFGSYGFPESHAASFALLCY 735
            +M   K    ++  R + V+G          A  IF+++  F  YGF +SHAA++AL+ Y
Sbjct: 713  AMGK-KDREEMDRQRAKFVEGATARAVDGGQASMIFDKVAKFAEYGFNKSHAAAYALIAY 771

Query: 736  ASSWLKCHEPAIFTCALVNSWPMGFYSPDQLLQEARRQGIEVRPVDVCHSDWDCTLEPDA 795
             ++WLK + PA F  A +          +   QE  R GI++ P D+  S    ++E   
Sbjct: 772  QTAWLKANYPAEFMAATMTYEMSNTDKLNSFRQELDRLGIKLLPPDINASQPTFSVEVLP 831

Query: 796  EGTLAIRMGLRLVRGLAEADAKRVQQARSQ-RPWRNVEDLCLRAG---LDARARARLADG 851
            +G  A+R  L  ++ + EA  K +   R +   +++V D   R     L+ R    +   
Sbjct: 832  DGGSAVRYALAALKNVGEAAMKSLVDERERGGRFKDVGDFAARMDSKVLNRRQLENMVKA 891

Query: 852  GALRALASDRHQ--------ARWQVAAVQ----PQLPLFADVQALPEEPVQLPVPTVGED 899
            G   +L  +R +         R+  +A +     Q+ L     A   +    P  +  E 
Sbjct: 892  GVFDSLDKNRGRLFKNADTLCRYAASAAEDRDSSQMSLLGGSNAPTLKLESGPDWSPHEK 951

Query: 900  LMADYQTLGTTLGPHPLALLRARLRALGCRSSSEL-QGVEHG--DNIAVAGLVVGRQRPQ 956
            L  +++ +G  L  HPL      ++ L     +EL + ++ G    + +AG ++ +Q   
Sbjct: 952  LNQEFEAVGFYLSAHPLDAYAKSMKRLNVLKIAELPRHLQSGGKGRVRLAGSLLSKQERV 1011

Query: 957  TASG--VTFVTLEDEHGMVNVVVWRALAERQRRAL--VGSQLLKVSGRLEQE 1004
            +A G    F+   D  GM  V  +  +    R  L   G  L+ V  +LE++
Sbjct: 1012 SAKGSRYAFLQFSDASGMFEVTCFSEILATSRELLDAGGPLLIDVDAKLEED 1063