Pairwise Alignments

Query, 1033 a.a., error-prone DNA polymerase from Pseudomonas putida KT2440

Subject, 1163 a.a., DNA polymerase III subunit alpha from Azospirillum sp. SherDot2

 Score =  357 bits (915), Expect = e-102
 Identities = 322/1101 (29%), Positives = 501/1101 (45%), Gaps = 115/1101 (10%)

Query: 13   YAELHCLSNFSFQRGASSADELFRRAREQGYQALAITDECTLAGIVRAWQAAKVHQLRLI 72
            +  L   S +S   GA    EL +   +Q   A+A+TD   L G +    AA    L+ I
Sbjct: 6    FIHLRVHSAYSLSEGAIKVKELVKLCLKQQMPAVAVTDTGNLFGALEFALAASDAGLQPI 65

Query: 73   VGSEVQLCD-GP----------------KLVLLVENLTGYQNLCALITRARRRAEKGAY- 114
            +G+ + +   GP                +LVLL +N  GY+NL AL+++A   ++  A  
Sbjct: 66   IGTVLGITRVGPAQTKPGLPGKAAATPDQLVLLCQNEEGYRNLAALVSKAFLESDPLAGP 125

Query: 115  QLFRDDLLLHHQGLLALWVAADSG----------DTATGAW--LRSVFAERLWLAVHLHR 162
            Q+  D L  H  GL+AL                 D A      L+ +F  RL++ +  H 
Sbjct: 126  QVTLDALDGHSAGLIALTGGPGGSVGRLLHEGQKDLALDVLERLKRLFPGRLYVELQRHE 185

Query: 163  G-------SDDAVRLQRLRALAADVGIRAVACGDVHMHVRGRRALQDCMTAIRQHCQVSE 215
            G       +++A+    L  LA    +  VA  D +          D +  I +   +S+
Sbjct: 186  GGRGHFAAAENAIE-PALIDLAYAHDLPLVATNDCYFATADMYEAHDALMCIAEGAYLSQ 244

Query: 216  AGRFLFANGERHLRSQAQLAELYP--LDLLAETLVIARRCQFDLSELNYQYPRELVPEGH 273
              R       R  +S  ++  L+    + L  T+ IARRC F L  +    P      G 
Sbjct: 245  EDRRRLTPDHR-FKSAEEMRLLFADLPEALDNTVAIARRCSFLLKPIKPILPPFACEGGR 303

Query: 274  TPASWLRELCEQGMPLRW------PD-GPSGKVR------DVLAKELGLIEELGYESYFL 320
            T    LR     G+ +R       PD  P  +        + L  EL +I ++ +  YFL
Sbjct: 304  TEDDELRAQSRAGLEMRLEKVVYTPDMTPEQRAETRRTYFERLEFELDVIVKMKFPGYFL 363

Query: 321  TVHDIVAFARSQRI-LCQGRGSAANSVVCFVLGITELDPMKHHLLFERFLSRERNEPPDI 379
             V D + +A++Q I +  GRGS A SVV + L IT+LDP++  LLFERFL+ ER   PD 
Sbjct: 364  IVSDFIKWAKNQDIPVGPGRGSGAGSVVAWALTITDLDPLRFGLLFERFLNPERVSMPDF 423

Query: 380  DVDFEHDRREEVIQYVFRRYGRHRAALTAVVNTYHAAGAVRDVARALGLPADQVDALAKC 439
            D+DF  DRREEVI+YV  +YG  R A         A   +RDV R L +P  QVD + K 
Sbjct: 424  DIDFCQDRREEVIRYVQNKYGYDRVAQIITFGKLQARAVLRDVGRVLQMPYGQVDKICKM 483

Query: 440  CGR-------WSDRIPDDQRLAEAGFEAGSPSLRRVLVLAGELIGFPRHLSQHPGGFVIS 492
                          +  ++ L +A    G  ++R ++ +A +L G  RH S H  G VI+
Sbjct: 484  VPNNPANPVTLQQALDSEEMLRQA--RDGDDTVRHLIDIALKLEGLYRHASTHAAGVVIA 541

Query: 493  QQPLDQLVPVENAAMPERTVIQWDKDDLDMVGLLKVDVLALGMLSALRRCFDQLQHHRGR 552
             +PL +LVP+      +  V Q++   ++  GL+K D L L  L+ L+   D +      
Sbjct: 542  DRPLQELVPLYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLKTAVDLIPEKP-- 599

Query: 553  HLTLATIPSEDPATYAMISRAETMGVFQIESRAQMAMLPRLRPQKFYDLVIEVAIVRPGP 612
               L T+P +D  +Y ++SRAE  GVFQ+ES     +L RL+P +  D++  V++ RPGP
Sbjct: 600  --DLTTVPLDDEKSYQLLSRAEATGVFQLESSGMRDVLRRLKPNRLEDIIALVSLYRPGP 657

Query: 613  IQGDMVHPYLRRRLKQEPVTYPSPQLKEVFERTLGVPLFQEQVMELAMVAADYTPGEADQ 672
            +  D +  Y+R +  +E   Y    L+ + + T G+ ++QEQVM++A V + Y+ G AD 
Sbjct: 658  M--DNIPKYIRVKNGEEKADYMHDSLEGILKETFGIMIYQEQVMQIAQVLSGYSLGGADL 715

Query: 673  LRRSMAAWKRHGGLEPHRERLVQGMLRNGYTLAFAERIFEQIKGFGSYGFPESHAASFAL 732
            LRR+M   K    ++  R+    G    G     A  IF+Q+  F  YGF +SHAA++AL
Sbjct: 716  LRRAMGK-KIKEEMDNQRKIFCDGAESRGVKADLASMIFDQVMKFAGYGFNKSHAAAYAL 774

Query: 733  LCYASSWLKCHEPAIFTCALVNSWPMGFYSPDQL---LQEARRQGIEVRPVDVCHSDWDC 789
            + Y +++LK + P  F  A   S  +   + D+L    QE  R  + +   D+  SD   
Sbjct: 775  VAYHTAYLKANHPVEFMAA---SMTLDLGNTDKLNVFRQELARLRVRLLTPDINKSDAIF 831

Query: 790  TLEPDAEGTLAIRMGLRLVRGLAEADAKR-VQQARSQRPWRNVEDLCLRAGL---DARAR 845
             +E  A+GT A+R  L  V+G+ +   K  V++ R   P++++ D   R  L   + R  
Sbjct: 832  GVEQLADGTKAVRYALAAVKGVGQPAMKAVVEERRKNGPFKSLFDFARRLDLKTINKRQL 891

Query: 846  ARLADGGALRALASDRHQARWQVAAVQPQLPLFADVQALPEEP----------VQLPVPT 895
              LA  GA   L  +R     QV A    +  +A  +A   +             LP P 
Sbjct: 892  ENLACAGAFDGLNPNRA----QVHAALETIIRYAQAEAAERDSGIGNLFGGGGGGLPEPE 947

Query: 896  VG--------EDLMADYQTLGTTLGPHPLALLRARLRALGCRSSSELQGVEHGDNI---A 944
            +         E L  ++  +G  L  HPL      L  +    S++L  V     +   A
Sbjct: 948  MPKVKDWEPLEKLKHEFGAIGFYLSAHPLDAYSGPLGRMKVVRSADLANVAKAGGMTRRA 1007

Query: 945  VAGLVVGRQRPQTASG--VTFVTLEDEHGMVNVVVWRALAERQRRALV--GSQLLKVSGR 1000
            +AG++V ++   + SG    FV L D  G   V ++  +    R  L    + LL V  +
Sbjct: 1008 MAGIIVSKKEKTSKSGNRFAFVELSDAAGGYEVTLFSEILAVNRALLEPGNAVLLTVDVQ 1067

Query: 1001 LEQENGVRHLIARRLEDVSPL 1021
            L  E      I    +++ PL
Sbjct: 1068 LNGEE-----IRLTCQEIKPL 1083