Pairwise Alignments

Query, 472 a.a., DNA linked enzyme involved in DNA repair from Pseudomonas putida KT2440

Subject, 467 a.a., DNA polymerase IV-like protein ImuB from Sphingobium sp. HT1-2

 Score =  110 bits (274), Expect = 1e-28
 Identities = 121/469 (25%), Positives = 194/469 (41%), Gaps = 40/469 (8%)

Query: 42  VNPAAAALGLRAGQTLTAARALADGFTCVEADPKRIDQVQQLLAAWA-YRFSAQVSLHYP 100
           V+ AA ALG+  G T+T AR LA     ++A P       + LA WA  R+S  V+   P
Sbjct: 1   VDAAARALGVMPGMTVTKARMLAPELEVIDALPDADMDGLRRLALWAGQRYSPIVAPDAP 60

Query: 101 RALLLEVGSSLQLFGPWPLFEARLRQELAELGLRQRIVLASNPVAARMLANG-HDGLAVG 159
             L +++     LFG        L + +A  G+   I +A     A  +A    DG  V 
Sbjct: 61  DGLWIDITGCASLFGSETALLKDLHRRIAAFGVAVHIAVADTAGCAHAVARHVRDGRPVV 120

Query: 160 -DVDATRAALLGMPITRVGLPAEAAEAFARMGLHQLGQVLALPRDTLARRFAAQVQLHLD 218
            +    R A+  +PI  + L AE  E   ++G  ++ Q+L  PR  LA+RF   +   LD
Sbjct: 121 IEPGQHRRAMELLPIPALRLEAEIVEGLRKLGFERVEQLLGAPRAPLAKRFGRSLHRRLD 180

Query: 219 QLLGLRNLGLDFYQPPDRFETRLELNFDVESHQALLFPLRRMLNDLAAFLAGRDCGVQRF 278
           Q +G     ++   P      +      + + +A    +  ++ D+   LA    G +R 
Sbjct: 181 QAIGQVAEPIEPIFPEQMPRAQRGFMEPIATPEAFAQVIGDLVADIVEQLARAGRGGRRL 240

Query: 279 CLHLEHAEGPDTLLKVGLLAAERDAAMLFELARGRLEPLRIPAPVRNLRLVAEDLPPFVP 338
             +    +G   ++++G     RDA  L +L   ++E +     +  + L+   +    P
Sbjct: 241 DCYFHRVDGHCQVIRIGTATPSRDAGHLAKLLCAKIETVEPGLGIEAMTLLVSLMEAAAP 300

Query: 339 QHQALFDPRAQQAQPWAQLRERLRARLGDEAVKGLGAAADHRPE----CAWHLAEQGAQG 394
           +     +   ++    A L + L  R G   +  +       PE     A  L E    G
Sbjct: 301 RQGESLEQLGRRGPDLAALVDTLANRFGSRNLHRMAPCPSGMPERSATGAPALGEARGMG 360

Query: 395 NMPVAPGSRPGWLLSAP-----IAL--DDA---------AYQV-QGYA-ERIESGWWDGG 436
                P  RP  +L+ P     IAL  DDA          Y+V QG   ER+   WW  G
Sbjct: 361 WDDDLP--RPARMLAKPEPIEVIALLPDDAPRMFIWRGKRYRVTQGDGPERLHGEWWRDG 418

Query: 437 DVR-------RDYYRIETRDGLRGWAYR----DLSQAGPL--WLQGWFA 472
            +        RDYY++ET  G R W +R    + +  GP+  ++ G FA
Sbjct: 419 GIEGRQPLSVRDYYQVETVSGGRYWLFRAGDGESAATGPMRWFIHGAFA 467