Pairwise Alignments

Query, 202 a.a., transcriptional repressor from Pseudomonas putida KT2440

Subject, 236 a.a., LexA repressor from Xanthobacter sp. DMC5

 Score =  104 bits (260), Expect = 1e-27
 Identities = 75/235 (31%), Positives = 111/235 (47%), Gaps = 38/235 (16%)

Query: 4   LTPKRRAIFEFIRERIAEHGQPPSLADIATRFGFASRSVARKHITALCQAGYIDVTPNQA 63
           LT K+  +  FI ER+ E G PPS  ++       S+S   + ITAL + G+I   PN+A
Sbjct: 2   LTRKQYDLLRFIHERLKETGVPPSFDEMKEALDLRSKSGIHRLITALEERGFIRRLPNRA 61

Query: 64  RGIRL------------------------------------AEPLRRPEILEIPVLGQVA 87
           R + +                                    AE     +++ +PV+G++A
Sbjct: 62  RALEVVRLPDSVAPGLASARSAGRGFSPSVIEGSLGKVRPVAEDDEAGQVVSVPVMGRIA 121

Query: 88  AGAPIGPDLGIHEQLLLDPSLFRRTPDYLLKVRGDSMIDDGIFDGDLVGILQQADARDGQ 147
           AG PI         L + P +      + L+VRGDSMI+ GI DGD V I +   A  G 
Sbjct: 122 AGTPISAIQSRSHTLNIPPEMLGSGEHFALEVRGDSMIEAGILDGDTVLIRKCDSADTGD 181

Query: 148 IVVARLDG-EVTIKRLQRQGGTYRLLPRNPAYAPIDVQPEQDFFIEGVFCGLLRR 201
           I+VA +D  E T+KRL+++G +  L   NPAY      P++   I+G   GL+RR
Sbjct: 182 IIVALVDDEEATLKRLRKKGASIALEAANPAYETRIFGPDR-VRIQGRLIGLMRR 235