Pairwise Alignments

Query, 202 a.a., transcriptional repressor from Pseudomonas putida KT2440

Subject, 240 a.a., LexA repressor from Agrobacterium fabrum C58

 Score =  107 bits (266), Expect = 2e-28
 Identities = 81/238 (34%), Positives = 113/238 (47%), Gaps = 41/238 (17%)

Query: 4   LTPKRRAIFEFIRERIAEHGQPPSLADIATRFGFASRSVARKHITALCQAGYIDVTPNQA 63
           LT K++ +  FI ER+ E G PPS  ++      AS+S   + ITAL + G+I   PN+A
Sbjct: 2   LTRKQQELLLFIHERMKESGVPPSFDEMKDALDLASKSGIHRLITALEERGFIRRLPNRA 61

Query: 64  RGIRL----------AEPLR--RPEILE---------------------------IPVLG 84
           R + +          A P R   P ++E                           IPV+G
Sbjct: 62  RALEVIKLPEAYTPGARPQRGFSPSVIEGSLGKPKEPEPAPAVKAPANDFAGAATIPVMG 121

Query: 85  QVAAGAPIGPDLGIHEQLLLDPSLFRRTPDYLLKVRGDSMIDDGIFDGDLVGILQQADAR 144
           ++AAG PI         L +   +      Y L+V+GDSMI+ GIFDGD V I     A 
Sbjct: 122 RIAAGVPISAIQNNTHDLAVPVDMLGSGEHYALEVKGDSMIEAGIFDGDTVIIRNGNTAN 181

Query: 145 DGQIVVARLDG-EVTIKRLQRQGGTYRLLPRNPAYAPIDVQPEQDFFIEGVFCGLLRR 201
            G IVVA +D  E T+KR +R+G +  L   NPAY      P++   I+G   GL+RR
Sbjct: 182 PGDIVVALVDDEEATLKRFRRKGASIALEAANPAYETRIFGPDR-VKIQGKLVGLIRR 238