Pairwise Alignments

Query, 1385 a.a., Rhs-related protein from Pseudomonas putida KT2440

Subject, 1485 a.a., T6SS PAAR-repeat protein / RhaS protein from Variovorax sp. SCN45

 Score =  722 bits (1863), Expect = 0.0
 Identities = 515/1486 (34%), Positives = 724/1486 (48%), Gaps = 170/1486 (11%)

Query: 4    AARFGDEISHTSA--------LGGFLIGAALGIALVATVAIATFTCGFGVALLAGL---- 51
            AAR  D I+HT+A         GG + G A+G A+    A    T G    L+AG     
Sbjct: 6    AARLHDPIAHTNAHARFWAKFAGGLIGGIAVGFAVGVAAAAVVGTGGLAGPLVAGAVVVG 65

Query: 52   AAGIGGSLLTAAGEAIGSMFS----SPSGTITTASPNVFINSRK--AARVEKSIG----A 101
            A   GG L  + GE+I         + +G IT+ S +VFI+S+   AAR    +     +
Sbjct: 66   ARMAGGYLGASLGESIADALVPETLTVTGMITSGSSDVFIDSKAIGAARASPEMPMDTVS 125

Query: 102  CDKHPGPVQIAEGSTNVFINSVAAARKGDKLTCGATISGGSDNVIIGGGTYRYLPVDDEV 161
            C K    + +AEG+  VF+N   A+RK D   CGA +S GS  V IGG T R   V DEV
Sbjct: 126  CKKDSPQILLAEGAETVFVNMGVASRKDDHTECGAKVSEGSPTVFIGGPTARVREVADEV 185

Query: 162  PEWLRTTVDVLMAIAGAAGGIAQLIKAGTQAGMKAVMPCALKFTAGFVAGEVASRYVVEP 221
            P   +  V +   +     G+  L K   Q   K  +PC ++   G   G          
Sbjct: 186  PLISKVLVTIFNLVM-IYRGLRCLPKLARQG--KNALPCLIEGAVGLGMG---------- 232

Query: 222  VARKAIGGLV---GNPVDLTTGRKLI--PDEIDFSLPGLMPIEWSRFYAS-DLTVDSVLG 275
                 I GLV   GNPV   TG K +    E+DF+LPG +PI W RFY+S DL  D  LG
Sbjct: 233  -----IHGLVSSFGNPVHAATGGKFLGGESELDFTLPGPLPIAWQRFYSSHDLRRDGALG 287

Query: 276  RGWVLPWEQSLR-----RQGAFIYLTDNQGREVPFVTLQPGQRIYNPHEQVYLVCTEGGH 330
            +GW LP+   LR          + L D Q R +    ++PG R Y+  + + L  TEGGH
Sbjct: 288  QGWSLPYAMELRLGSDEESQPIVTLIDEQRRPMVLPGIEPGTRQYSLRDGLDLCRTEGGH 347

Query: 331  YILQTLDNLFFYFGEVPDTNTE---VPLQRIENVLGHFLHFTRTPDGTLTDISATGGTRV 387
            Y +     LFF F    +       + L RIE+  G+F+       G L +++ + G  +
Sbjct: 348  YFIHVPGGLFFMFAPPAEGEAHAQTLKLARIEDRNGNFIDLRHDALGRLAELTDSTGRLL 407

Query: 388  HLHYDNPLGRLTDIKRVVN--NEAVETLTQYRYDEHGQLSAVINRNGDTVRSFSY-ADGL 444
             L Y     +L  ++       E    L  YR+D  G+L  V +RNG   R F Y A GL
Sbjct: 408  ALDYAGESRQLRAVRLAAGAPGELPGVLVAYRHDSEGRLLDVTDRNGAVARRFGYDAQGL 467

Query: 445  MVTHSNALGLGCHYRWQTLGDKPRVVEHWTSDGEHYHFRY-------DLDSRTSWATDVL 497
            M  H++A GL C Y WQ       V  HWT+DGE Y  R         L    +   D L
Sbjct: 468  MNFHADAAGLECRYEWQGTAGDAHVARHWTNDGESYTVRRMPPAADDALALGQTLVVDQL 527

Query: 498  GRELEVQYNADHRVVASRDYGGERYAIELDEHGNMVGLTLPDGNRLQFKYDEFSRLLEET 557
            GRE    +NAD +V    D  G ++  E +E   +V +T P G   +  YD    +   T
Sbjct: 528  GREFAWHWNADLQVTDYADAAGRQWHAEYNELRQLVAITEPGGATTRCTYDPMGFMSSRT 587

Query: 558  DPLGRK-----TQYEYHHLTTLVTQVSYPDGSTWRARFDDKGNLLAEFDALGQMTEYLNS 612
            D LGR      T++      TL       DGSTW   + D+GNL+ E D LG+ TEY   
Sbjct: 588  DALGRTQSTGWTEFGEPWRETLA------DGSTWTYAYSDQGNLVRETDPLGRTTEYAYD 641

Query: 613  DDGLPHTIIDATYKSKYLWWNTLAQVERYQDCSGKSTYYRYDERQHLVAVTDALNQTTTL 672
              GLP  + D    +  + WN  AQ+    DCSGK+T Y YD   HL  VTDA  Q T L
Sbjct: 642  RRGLPIVVTDGKGGTNRMAWNECAQLVSLTDCSGKTTRYTYDGWCHLQTVTDAAGQRTRL 701

Query: 673  ARKPDGEVLRISHPDGTTESFTYNVYGQVLSHTDGKGQTTRLMRTARGLPSSRQDAKGQR 732
                 G +L +S PD + +SF  +  G++++ TD   ++T+     RG P +RQDA+G+R
Sbjct: 702  THDAMGRLLSVSLPDQSHQSFRRDAAGRIVAATDALSRSTQFAFGLRGQPLTRQDAEGRR 761

Query: 733  VRYEYDKAMRLTALVNENNATYSFAYDASDRLSEEVRVDNLTRRFSYDVGG--------- 783
            + + YD A RL +LVNEN   + F  D +DR+ EE RV     +  YD  G         
Sbjct: 762  IAWHYDSAQRLQSLVNENGLHFEFIRDTADRVVEERRVGGTRVQVEYDANGWPVCITHVP 821

Query: 784  -----HLTRLDEIGYGENAERPERHTLFERDAIGRLIAKLNSDAQQRFTYDDGDRL---L 835
                  L   D  G    A RP R  L  RDA+GRL+AK       R+TYD  DRL   +
Sbjct: 822  GIGDEDLALHDGTGPRPAASRPLRTELL-RDAVGRLVAKRTGSHHYRYTYDLLDRLTEAV 880

Query: 836  SIERQPTGIGKQLGITEEKLEYAYDLLGRLTKEISPDGTLG------YEYDPLSNLTTLT 889
             +E    G   +       + +AYD LGRL +E + D T G      + +D L N T   
Sbjct: 881  KLEAPRPGTRDEPRALHRTV-FAYDKLGRLIEETAIDETTGETHTLRHAHDELGNRTQTV 939

Query: 890  LPD-------GRKVNHLYYGSGHLHQLNLD---------GQVISDMERDDLHREVYRTQG 933
            LP         R +N+LYYGSGHLHQ+NL           Q+ISD+ERDDLHREV R+QG
Sbjct: 940  LPAIASQPGVQRALNYLYYGSGHLHQVNLSHQHGNAPEVHQLISDIERDDLHREVARSQG 999

Query: 934  KLTSCFGYDAMGRKA--WQFASTLPADKLSQ-------VHNTGINTSLLVEHAYNPIHRR 984
             L + F  D +GR+A  W  A  L     +Q       + + G   + L++     + + 
Sbjct: 1000 ALHTRFVLDPLGRRAASWCRAGGLDTAFTTQDPSWRQAIDSAGTPGARLLD----GLMKE 1055

Query: 985  YQYDPAGELVRTLDKLRGEIKYEYEANGQLRSRDTG-SLIGSEEFRYDPAANRLDFNARQ 1043
            Y YDP GEL ++   L+G   + ++A G++     G +   SE F YDPA N LD ++  
Sbjct: 1056 YSYDPVGELRQSRHSLQGTTAHRFDATGRIEQTVRGAAAANSERFAYDPAGNLLDASSTA 1115

Query: 1044 FDKVKDNRIKQWRDQEYRYDPWGNLIEKRSGHSKLQHFSYDCENRLVRAETLVN-GKLES 1102
               V+DN ++ + D+ Y YD  G L+ KR+G    Q F +D E+RLV   T    G  E+
Sbjct: 1116 PGHVRDNLVRVFEDKRYSYDGHGRLVRKRAGRHTDQRFEWDEESRLVAVHTTRRPGTPEA 1175

Query: 1103 QGE---YRYDSLGRRIAKQAEINGEVEQKRFLWQGLRMLREETPGQSILYLYEPGSYAPL 1159
              +   + YD++GRR+AK           RF+W+G+R++ E    Q + Y+YEPG +  +
Sbjct: 1176 TTQLTRFDYDAMGRRVAKHDAFG----STRFIWEGMRLIEERRGSQVVSYVYEPGGHVLM 1231

Query: 1160 ARVDQVEGEGQ-----KVYYFHTDQIGTPLELTDSEGEIVWQATYRSWGTIET------- 1207
            AR+D      +     +V++FH D  G P EL+++EG++ W+A+YR+WG   T       
Sbjct: 1232 ARLDAKAEPAEASATAQVFHFHNDTAGLPEELSNTEGQLCWRASYRTWGATVTEQWEVTA 1291

Query: 1208 ----------LSIKEVDQNLRFQGQYFDAETGLHYNTFRYYYSEVGRYVTQDPIGLDGGL 1257
                         + ++QNLRFQGQY D +TGLHYNTFR+Y  ++GR++  DPIGL GG 
Sbjct: 1292 LNGRAVASTDTVPQAIEQNLRFQGQYLDRDTGLHYNTFRFYDPDIGRFIGPDPIGLMGGS 1351

Query: 1258 NLYRYGQNPAGWIDPWGWECWSTARKNYWKAEAKAPTRAYSPTNLVRMAEGKAPKMTVEV 1317
            NL++Y  NP+ WIDP G      A  N  K  A  P +  +  +   M + +A K   E 
Sbjct: 1352 NLHQYAPNPSRWIDPLGLS--YCAFGNASKPRAPRPGKDIA-VDADGMVKSQAGKQFPEG 1408

Query: 1318 ISRKTDKISIREYALELHHNDIPQRV----GGAGVHDSSNLLALTP 1359
             S   D     +  L  H+++IP+      G   V D S+++  +P
Sbjct: 1409 ASTTVDP---TKSPLSGHYHEIPEGTKMPSGIDIVRDGSDVIPNSP 1451