Pairwise Alignments

Query, 1385 a.a., Rhs-related protein from Pseudomonas putida KT2440

Subject, 477 a.a., conserved protein, rhs-like protein from Escherichia coli BL21

 Score =  103 bits (256), Expect = 5e-26
 Identities = 89/317 (28%), Positives = 136/317 (42%), Gaps = 28/317 (8%)

Query: 982  HRRYQYDPAGELVRTLDKLRGEI---------KYEYEANGQL----RSRDTGSLIGSEEF 1028
            H  Y+YD  G L    D +   +         +Y Y++  +L    R++    L+ S  +
Sbjct: 12   HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR-Y 70

Query: 1029 RYDPAANRLDFNARQFDKVKDNRIKQWRDQEYRYDPWGN--LIEKRSGHSKLQH-FSYDC 1085
             YDP   R+     + ++     +   R  +  +  W    L   ++  S++Q  +    
Sbjct: 71   LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRSRIQTIYQPGS 130

Query: 1086 ENRLVRAETLVNGKLESQGEYRYDSLGRRIAKQAEINGEVEQKRFLWQGLRMLREE---- 1141
               L+R ET       +Q     D+L +      E  G V     L Q L  L  E    
Sbjct: 131  FTPLIRVETATGELARTQRRSLADALQQ---SGGEDGGSVVFPPVLVQMLDRLESEILAD 187

Query: 1142 -TPGQSILYLYEPGSYAPLAR--VDQVEGEGQKVYYFHTDQIGTPLELTDSEGEIVWQAT 1198
                +S  +L   G      +  +D V    +K++ +H D  G PL L  +EG   W A 
Sbjct: 188  RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247

Query: 1199 YRSWGTI-ETLSIKEVDQNLRFQGQYFDAETGLHYNTFRYYYSEVGRYVTQDPIGLDGGL 1257
            Y  WG +    +  ++ Q +R  GQ +D E+GL+YN  RYY    GRY+TQDPIGL GG 
Sbjct: 248  YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307

Query: 1258 NLYRYGQNPAGWIDPWG 1274
            N Y+Y  NP  +ID  G
Sbjct: 308  NFYQYPLNPVQYIDSMG 324



 Score = 63.5 bits (153), Expect = 4e-14
 Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 20/140 (14%)

Query: 1049 DNRIKQWRDQEYRYDPWGNLIEK---------RSGHSKLQHFSYDCENRLVRAETLVNGK 1099
            DNRI +     YRYD  G L EK         R+   +   + YD ++RLV        +
Sbjct: 4    DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63

Query: 1100 LESQGEYRYDSLGRRIAK-----QAEINGEVEQKR------FLWQGLRMLREETPGQSIL 1148
               +  Y YD LGRR+AK     + ++ G +   R      + W G R+   +     I 
Sbjct: 64   PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRSRIQ 123

Query: 1149 YLYEPGSYAPLARVDQVEGE 1168
             +Y+PGS+ PL RV+   GE
Sbjct: 124  TIYQPGSFTPLIRVETATGE 143