Pairwise Alignments

Query, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 646 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

 Score =  399 bits (1025), Expect = e-115
 Identities = 229/635 (36%), Positives = 348/635 (54%), Gaps = 44/635 (6%)

Query: 8   MLAPQNRRLFKLNILTQTANDEFLLEHFSGTEELSKLYEFDLALLSQQSDVKLKSLIGSQ 67
           ML  Q  RL K  I +    D  LL    G EEL +L+ ++L L S  +++ L  L+G  
Sbjct: 1   MLFNQASRLAK--ITSPLGPDVLLLNEMGGGEELGRLFNYELQLTSLDANIDLNQLLGKP 58

Query: 68  ATVEIELSNGSFRHINGYVQRFSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQEKSVQ 127
            +V ++L++G  RH +G V R S     G +  Y   L PWLW+L+   D RIFQ  S+ 
Sbjct: 59  MSVGLQLADGGERHFHGIVARCSQNIDQGQFASYQVTLRPWLWLLSRTSDCRIFQNLSIP 118

Query: 128 AVVSEVFAGFGTLAKYEFRVSKPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEHTADS 187
            ++ +VF   G  + +E  +S+P +   Y  QYRE+ F+FV RL+E EG++Y+F H  D 
Sbjct: 119 QIIKQVFRDLG-FSDFEDALSRPYREWEYCVQYRETSFDFVSRLMEQEGIYYFFRHEQDR 177

Query: 188 HLMVITDDSSTLLPLPEQPQIRYHSASVTETA-DSITQWQSTRQLQSGQIAVRTFDYRQP 246
           H++V+ D       +P    I Y+     +   D +  W    ++Q G + +  +D+++P
Sbjct: 178 HVLVLADAYGAHTTVPGYASIPYYPKDEQQRERDHMHNWHLAHEVQPGSMELNDYDFQRP 237

Query: 247 RNFLPV--TMQSLNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYGE 304
              + V   M   +  GD   + +YD+PG Y     EDGE   R RIEAL+ + +     
Sbjct: 238 SASIDVRSAMPRPHTAGD---YPLYDYPGTYVQS--EDGEHYARTRIEALQTLHEQIEFN 292

Query: 305 SNCRAMKPGYTFELTQHYLHDTGAAENRKFLLL---------SVEHRGSNNYMTGDQAGY 355
            N R +  G+ F LT     D    +NR++L++         S+E  G +       A +
Sbjct: 293 GNARGLGSGHLFSLTGFSRQD----QNREYLIVGCRYYIVQESLESGGGSG-----SAQF 343

Query: 356 VNRFVCVRKKIAYRPQLNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQF 415
            +   C+  + ++RP  NT +P++ GPQTA+VVGP GEEI+TD+ GRVK+ F+WDR  Q 
Sbjct: 344 ESSLTCIDAQQSFRPLANTHRPIVKGPQTALVVGPKGEEIWTDQYGRVKVHFYWDRHDQS 403

Query: 416 NDQSSCWVRVAQSGASGGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPPWSL 475
           N+ SSCW+RV+QS A   +GS+QIPR+G EV+V FL+G+PDRP+I G +YN+  T P+ L
Sbjct: 404 NENSSCWIRVSQSWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYDL 463

Query: 476 PANKTQSGFLTRSMKGDGGTANF--FRFEDKAGAEQIIMHAERNMDTEIELDETHDV--- 530
           P N TQSG  +RS KG G  ANF   R EDK G EQ+ +HAERN D  +E+DE+H V   
Sbjct: 464 PENATQSGMKSRSSKG-GSPANFNEIRMEDKKGLEQLYIHAERNQDIVVEVDESHSVGHD 522

Query: 531 -----GNNRSITVGGTHTETVKKDTVVQVTEGSYTLQVDNQFIQVAAKQHIILQVGDSSI 585
                G+N ++T+G      VK++ ++ V  G       +Q   +   +++ L  G+S +
Sbjct: 523 RNKSIGHNETVTIGNNRLRIVKQEDILSV--GQKKTDSISQSYVIEVGENLRLVCGESIL 580

Query: 586 TLTPEG-IEIKG-KVIVTTSTDTTQITGAAVRIND 618
            L   G I + G ++    S D    TG  + +N+
Sbjct: 581 ELNASGQINLTGVQISFYASGDAEFNTGGVLHLNN 615