Pairwise Alignments

Query, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 614 a.a., Rhs element Vgr protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  873 bits (2255), Expect = 0.0
 Identities = 420/614 (68%), Positives = 512/614 (83%), Gaps = 2/614 (0%)

Query: 4   DVLSMLAPQNRRLFKLNILTQTANDEFLLEHFSGTEELSKLYEFDLALLSQQSDVKLKSL 63
           D+ S+   QNRRLFKL +  +    E LL+ F+G+E LS  + F L L+S  + VKLKS 
Sbjct: 2   DLSSLFTAQNRRLFKLTMALK-GGQELLLDSFAGSEGLSADFGFQLDLISDDASVKLKSA 60

Query: 64  IGSQATVEIELSNGSFRHINGYVQRFSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQE 123
           IG  AT+EIEL+ G  R+ING+V  F   GSDGG  RY+A +G WL ++  R+D++I+Q+
Sbjct: 61  IGQSATIEIELATGGSRYINGHVLSFGNNGSDGGMSRYSAYIGSWLSLIAQRYDSQIYQD 120

Query: 124 KSVQAVVSEVFAGFGTLAKYEFRVSKPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEH 183
           ++V+ V+ +V   +  LAKYEFRV++ LK +SYITQYRESD +FV RLLE EGLF+YFEH
Sbjct: 121 QTVEQVIRKVLGRYDGLAKYEFRVNRTLKPYSYITQYRESDSHFVMRLLEQEGLFFYFEH 180

Query: 184 TADSHLMVITDDSSTLLPLPEQPQIRYHSASVTETADSITQWQSTRQLQSGQIAVRTFDY 243
           TADSH ++I DDS+ L PLPEQPQ+R+H+ASVTET+DSIT W S R+ Q+G+I+V+TFDY
Sbjct: 181 TADSHTLIIMDDSTVLTPLPEQPQVRFHTASVTETSDSITHWSSAREFQAGKISVQTFDY 240

Query: 244 RQPRNFLPVTMQSLNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYG 303
           RQP N +PVTM SLNQQGDV  +EI+D+ GQYTHG+ EDGE +VRNRIEALEL GKTF G
Sbjct: 241 RQPGNRIPVTMNSLNQQGDVPSYEIFDYMGQYTHGTPEDGELLVRNRIEALELKGKTFVG 300

Query: 304 ESNCRAMKPGYTFELTQHYLHDTGAAENRKFLLLSVEHRGSNNYMTGDQAGYVNRFVCVR 363
            SNCRAM+PGYTFELTQHY HDTG+ ++R+FLL+++EHRGSNNY +G QAGY N+  CVR
Sbjct: 301 SSNCRAMRPGYTFELTQHYEHDTGSPDDRQFLLMNIEHRGSNNYTSGSQAGYANKIYCVR 360

Query: 364 KKIAYRPQLNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQFNDQSSCWV 423
           KKI +RPQ++  KP I+GPQTAIVVGPPGEEI+TDE+GRVK+QFHWDR G+F+D+SSCWV
Sbjct: 361 KKIKFRPQMDLLKPGISGPQTAIVVGPPGEEIYTDEMGRVKVQFHWDRYGKFDDKSSCWV 420

Query: 424 RVAQSGASGGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPPWSLPANKTQSG 483
           RVAQSGASGGFGS+QIPRVGDEVVVVFLDGNPDRPL+MGSLYNS NTPPWSLPANKTQSG
Sbjct: 421 RVAQSGASGGFGSMQIPRVGDEVVVVFLDGNPDRPLVMGSLYNSQNTPPWSLPANKTQSG 480

Query: 484 FLTRSMKGDGGTANFFRFEDKAGAEQIIMHAERNMDTEIELDETHDVGNNRSITVGGTHT 543
           FLTRS KGDGGTANFFRFEDKAGAEQ+IMHAERNMDTEIELDE H+VGNNR +TVGGT+T
Sbjct: 481 FLTRSAKGDGGTANFFRFEDKAGAEQVIMHAERNMDTEIELDEKHEVGNNRKVTVGGTNT 540

Query: 544 ETVKKDTVVQVTEGSYTLQVDNQFIQVAAKQHIILQVGDSSITLTPEGIEIKGKVIVTTS 603
           E ++KDTV  V +GS+TL+VDNQFIQV AKQ+I+L+VGDSSI++TPEGI+IKGKVI    
Sbjct: 541 EIIQKDTVTNVQQGSFTLKVDNQFIQVDAKQYILLKVGDSSISITPEGIQIKGKVI-NVL 599

Query: 604 TDTTQITGAAVRIN 617
            ++T + G  V IN
Sbjct: 600 GESTFVKGDRVDIN 613