Pairwise Alignments

Query, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 725 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

 Score =  247 bits (631), Expect = 1e-69
 Identities = 177/629 (28%), Positives = 294/629 (46%), Gaps = 52/629 (8%)

Query: 29  EFLLEHFSGTEELSKLYEFDLALLSQQSDVKLKSLIGSQATVEIELSNGSFRHINGYVQR 88
           EF +  F   E +S  +   L L+S + DV    L+       +       R+++G V  
Sbjct: 19  EFEVVSFELDEAISSPFRLQLELVSFEDDVDFAQLLDKPVLFTLWQGERPLRYVHGLVST 78

Query: 89  FSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQEKSVQAVVSEVFAGFGTLAKYEFRVS 148
           FS   +     RY A++ P L     R + RIFQ+K+V  ++  +    G  A YE +  
Sbjct: 79  FSQGETGFDRTRYRALVEPVLARAGLRSNWRIFQQKTVPQILEIMLKRQGVNA-YELKCL 137

Query: 149 KPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEHTADSHLMVITDDSSTLLPLPE---- 204
            P +   +  Q  E+D +F+ RL   EG+ Y F+HT   HL++ITD    L  +      
Sbjct: 138 DPHQVREFCVQAGETDLDFMARLAAEEGIVYRFDHTPKQHLLIITDRLLALGQISRGAIK 197

Query: 205 --------------QPQIRYHSASVTETA-DSITQWQSTRQLQSGQIAVRTFDYRQPRNF 249
                           Q+ Y S    + A   + + + + Q+++ +   R + +  P+  
Sbjct: 198 TDDEDEGFHNDDVGPDQVLYRSVGGGDQARPCLRRLRYSEQVRTARQVQRDYTFTHPQYR 257

Query: 250 LPVTMQSLNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYGESNCRA 309
                   +       +E +D+PG+Y   +   G      R+ AL    +    E +   
Sbjct: 258 QEHQAYDNSNTHQSLNYERFDYPGRYKRDAV--GVPFTATRLTALRHDARIAEVEGDDVR 315

Query: 310 MKPGYTFELTQHYLHDTGAAENRKFLLLSVEHRGSNNYMTGDQAG-------YVNRFVCV 362
           ++PG +F L +H   D     N  +  +SV H G+      ++A        Y    + V
Sbjct: 316 LQPGLSFTLIEHPREDL----NVHWRTVSVHHEGTQFTSLQEEAADSQQGTRYKQEALLV 371

Query: 363 RKKIAYRPQLNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQFNDQSSCW 422
             +  +RP     KP I+GP  A VVGP GEEI+ D+ GRVK+ F WDR+ + N+ SSCW
Sbjct: 372 PGRTEWRP-APLPKPRIDGPHMATVVGPKGEEIYCDQWGRVKVSFPWDRESENNEFSSCW 430

Query: 423 VRVAQSGASGGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPPWSLPANKTQS 482
           VRV+Q  A G +GS+ IPR+G +V++ +++ +PD+P+I G  Y     PP+ LP +KT+ 
Sbjct: 431 VRVSQGWAGGSWGSMAIPRIGQDVIIQYVNADPDQPMITGRTYCGNQLPPYDLPEHKTRM 490

Query: 483 GFLTRSMKGDGGTANFFRFEDKAGAEQIIMHAERNMDTEIELDETHDVGNNR-------- 534
              +++ KG+G   N  RFED+ G +++ +HAER+ +  ++ DET  VGN+R        
Sbjct: 491 TIKSQTHKGEG--FNELRFEDELGRQEVFIHAERDQNNIVKHDETTRVGNDRTERVERDE 548

Query: 535 SITVGGTHTETVKKDTVVQVTEGSYTLQVDNQFIQVAAKQHI------ILQVGD--SSIT 586
           +I++G    E + +D  V + +       ++  + +     I      I QVG+    IT
Sbjct: 549 TISIGQDRREDIARDESVGIGQNRVHEIGNDDSLSIGRNHRITTGKDRIEQVGNHRQDIT 608

Query: 587 LTPEGIEIKGKVIVTTSTDTTQITGAAVR 615
                +EI G      +  +T  TG A+R
Sbjct: 609 KANHTVEIGGHREQVVAGHSTLQTGEAIR 637