Pairwise Alignments

Query, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 722 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

 Score =  250 bits (638), Expect = 2e-70
 Identities = 172/579 (29%), Positives = 279/579 (48%), Gaps = 48/579 (8%)

Query: 30  FLLEHFSGTEELSKLYEFDLALLSQQSDVKLKSLIGSQATVEIELSNGSFRHINGYVQRF 89
           F +  F   E +S  +E +L L+S ++D+    L+       I       R+++G V  F
Sbjct: 20  FEVVSFELREGISAPFELELKLISFENDIDFGHLLDKPVLFTILDGERPVRYVHGLVSSF 79

Query: 90  STQGSDGGY-VRYAAVLGPWLWMLTCRFDTRIFQEKSVQAVVSEVFAGFGTLAKYEFRVS 148
           S QG  G Y   Y A++ P L     R + RIFQ K+V  ++  +    G + +YE R S
Sbjct: 80  S-QGESGFYRTYYHALVEPQLARARLRSNWRIFQHKTVPQILELMLKRQG-IDQYELRAS 137

Query: 149 KPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEHTADSHLMVITDDSSTL--------- 199
              +   +  Q  E+D  F+ RL   EG  Y F H+   H ++ITD   +L         
Sbjct: 138 MDHQVREFCVQAGETDLAFIARLAAEEGFVYRFAHSEKLHKLIITDRLQSLGLISHGAIK 197

Query: 200 ------------LPLPEQPQIRYHSASVTETADSITQWQSTRQLQSGQIAVRTFDYRQPR 247
                        P+     +   ++   +    + + + + Q+++ +   R   +  P 
Sbjct: 198 ADHEDEGFGDDDEPVGPDSVLYQANSGGDQAIPCLRRLRYSEQVRTARQVQRDHTFTHPA 257

Query: 248 NFLPVTMQSLNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYGESNC 307
                       +     +E +D+PG+Y   +   G+    NRI AL    +    + + 
Sbjct: 258 YRQEHRAAGPFLEHQSKDYEYFDYPGRYKRDAV--GKPFTENRITALRHDVRIAEVQGDD 315

Query: 308 RAMKPGYTFELTQHYLHDTGAAENRKFLLLSVEHRGSNNYMTGDQAG-------YVNRFV 360
             ++PG +F LT H   D     N  + + +V H GS      ++A        Y  + V
Sbjct: 316 VRLQPGLSFTLTDHPREDL----NVHWRVSTVHHEGSQPTSLQEEAAGADQGTRYEQKAV 371

Query: 361 CVRKKIAYRPQLNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQFNDQSS 420
            V  +  +RP     KP ++GP  A VVGPPGEEI+ DE GRVK+ F WDR+ Q N+ SS
Sbjct: 372 LVPGRTEWRPA-PLPKPRVDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRESQNNEFSS 430

Query: 421 CWVRVAQSGASGGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPPWSLPANKT 480
           CW+RV+Q  A G +GS+ IPR+G +V++ +++G+PD+P+I G  Y     PP+ LP +KT
Sbjct: 431 CWLRVSQGWAGGSWGSMAIPRIGQDVIIHYVNGDPDQPMITGRTYCGNQLPPYDLPRHKT 490

Query: 481 QSGFLTRSMKGDGGTANFFRFEDKAGAEQIIMHAERNMDTEIELDETHDVGNNR------ 534
           +    +++ KGDG   N  RFED+ G E++ +HA+R+ +  ++ DET  VGN+R      
Sbjct: 491 RMTIKSQTHKGDG--FNELRFEDELGQEEVFIHAQRDQNNVVKHDETTQVGNDRKEQVDN 548

Query: 535 --SITVGGTHTETVKKDTVVQVTEGSYTLQVDNQFIQVA 571
             SI +G   TETV  D  + + + +      N  I++A
Sbjct: 549 DESILIGHDRTETVGNDERITIGQDAALDIGRNHTIRIA 587