Pairwise Alignments

Query, 606 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 630 a.a., type VI secretion system baseplate subunit TssF from Variovorax sp. OAS795

 Score =  287 bits (734), Expect = 1e-81
 Identities = 202/640 (31%), Positives = 315/640 (49%), Gaps = 52/640 (8%)

Query: 5   LLPYYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARVHKKL 64
           LL  YE+EL + R    EFA  +PKIA RL IEG    DP+ ERLIEA +FLSARV+ KL
Sbjct: 5   LLNLYEQELRYFRESSSEFARAFPKIAHRLGIEGQEVADPYVERLIEATAFLSARVNLKL 64

Query: 65  DDEFPEIVESFLEVLYPHYLRPTPSMSIVELSLGRHE-KVTEAYRVARHTEMHANPVEG- 122
           D E+P      L+++YP++L PTP+M++   +    +  +     + R + + A    G 
Sbjct: 65  DAEYPRFTGHLLDIVYPNFLAPTPAMAVASFAHDPDDANLATGPTLPRGSGLRARQAVGQ 124

Query: 123 -VVCKFRTCYPVELWPIAVQQAS-FTEMERSAFNGHSADLVAR--LRIRLAATGDALFGQ 178
              C+FRT   + LWPI VQ+A  FT       N H      R  LRI L AT    F Q
Sbjct: 125 NTHCEFRTAGALRLWPIEVQRAQYFTYAPDLPLNTHPQSRAIRGGLRIGLHATAGLKFNQ 184

Query: 179 MDMNRLRFFLDGEATLMLQLYELLFN---NLAKATLSFDDQGRSREVALPADALKTVGYA 235
           + ++ L   L G   +  QL+E        +    LS     +    +LPA A+  VG+ 
Sbjct: 185 IAIDELVMHLGGAEDVAWQLHECALGQPIGVMVRPLSPTGALQGEARSLPASAIGAVGFE 244

Query: 236 RDEGLVDYSERSFLGYRLLHEYFTFPDKFMFFDLSGFARILQGKAIEQVEVNFYFSDYDL 295
            DE L+  +   F G+RLL EYF FP +F F  +SG   +L    +  +E+   FS  D 
Sbjct: 245 DDEALLPVTATGFSGFRLLQEYFAFPQRFQFLRISGLQALLSTMPVSDLELVLLFSRGD- 303

Query: 296 SERLARLTQNIGRNNFKLNCTPIINLFRQQAEPIKLTHTQHEYQVTPDT------RLHNA 349
               A L + +G +N +L+C PI+NLF ++ + + LT    ++ + PD        +H  
Sbjct: 304 ----AALEKLVGVDNVQLHCVPIVNLFNKRLDRVPLTEGVSQFHLVPDRTRPQDFEVHTV 359

Query: 350 AEVVSIDRVRRVRKLGGIDQVATCQ---PFFEP-RGEQDPHSSFWV---------ARRRN 396
            EVV            G D  A  Q   PF+    G +  H +++           R+R 
Sbjct: 360 TEVVG-------HGAPGADAAAAEQLFRPFYSAFHGTRHSHPAYFTTTRDPRMLSVRQRT 412

Query: 397 QGDATA-----MSIRVVDRDLELIDASSDTLSIGLTCSNRDVPLMLPFGGERGDFTIPAN 451
           +G  ++     + +++VD       A+   L++   C+NRD+PL++P G E  DF    +
Sbjct: 413 EGHRSSHIGSEVYMQIVDPQQAPYSAALRQLAVSALCTNRDLPLLMPLGRE-NDFDCIDS 471

Query: 452 SVIKDIRCLRKPTATVRVPLGKGLIWRLIAHLSLNHLSL----VSQGREVLLELLSLYNY 507
              + +R +R P+  V   + +GL WR++ HL+LN+LS+      QG   L E L LY  
Sbjct: 472 FPAQRVRMVRGPSRPVSPVVSQGLGWRVLDHLALNYLSISDSTPEQGAAALRETLMLYAV 531

Query: 508 RNVSAIRKQINGIKAISSEPVVARIGHPRP-NFVRGVGITLTLDESQFIGSGVFLFGRVL 566
                 + Q+ G+ ++ S+PV  R+    P  F RG+ +T+ +D+  F G  VFLFG VL
Sbjct: 532 HADEMRQGQVRGLLSVKSKPVARRLPLKGPIAFGRGLEVTVEVDKDAFHGHSVFLFGAVL 591

Query: 567 DHFFGQYCSMNSFTQLTLRTQQREKRVVQWPARTGDQPLV 606
             +  ++  +N F +  LR   + +  ++W    G + ++
Sbjct: 592 SRYLARHVEVNHFVETVLRVAGKGEN-MRWRPLCGTRQIL 630