Pairwise Alignments

Query, 606 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 588 a.a., type VI secretion system baseplate subunit TssF from Dickeya dianthicola ME23

 Score =  270 bits (691), Expect = 1e-76
 Identities = 193/620 (31%), Positives = 319/620 (51%), Gaps = 58/620 (9%)

Query: 8   YYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARVHKKLDDE 67
           ++  EL++LR  G+EFA  +P++   L    +   DP  ERL+E F+FL+  +  K++DE
Sbjct: 6   FFRDELAYLRLQGREFAKAHPELTRFL---SEQTTDPDVERLLEGFAFLTGSLRAKIEDE 62

Query: 68  FPEIVESFLEVLYPHYLRPTPSMSIVELSLGRHEKVTEAYRVARHTEMHANPVEGVVCKF 127
           FPE+    L +L+P+YLRP PSM+I++ S+        A+ VAR  E+ + P++ VVC F
Sbjct: 63  FPELTHGLLGMLWPNYLRPVPSMTIMQFSVLPGAIAQPAF-VARGCELDSLPIDDVVCHF 121

Query: 128 RTCYPVELWPIAVQQASFTEMERSAFNGHSADLVARLRIRLAATGDALFGQMDMNRLRFF 187
           +TC+   ++P  +++           N  S + ++ + + +   G      + +++LRFF
Sbjct: 122 QTCHDAWIYPADIRR----------INAQSGNDMSAITLDIGLHGPLSLADLQLDKLRFF 171

Query: 188 LDGEATLMLQLYELLFNNLAKATLSFDDQGRSREVALPADALKTVGYARDEGLVDYSERS 247
           L G+     +LY  + + L+   L  D +   +E    A+ LKTVG+ RD+ ++ Y    
Sbjct: 172 LGGDRYTAYELYFWIASQLSHIELEIDGKRFRQE----ANVLKTVGFERDDAMLPYPGNV 227

Query: 248 FLGYRLLHEYFTFPDKFMFFDLSGFARILQGKAIEQVEVNFYFSDYDLSERLARLTQNIG 307
           + GYR+L EYF FP+ F+FF LSG     Q   +   +++F F D  L   L      I 
Sbjct: 228 YSGYRILQEYFCFPESFLFFQLSGAGWPNQPLTVTDFKLHFCF-DRPLPAEL-----KIR 281

Query: 308 RNNFKLNCTPIINLFRQQAEPIKLTHTQHEYQVTPDTRLHNAAEVVSIDRVR-----RVR 362
            ++F LNC P INLFR  +EPI L   Q +Y +    R  ++ E+ SID V         
Sbjct: 282 PDSFMLNCVPAINLFRHDSEPINLDGRQTDYPLKASYRHADSFEIFSIDNVEGWVEGNSG 341

Query: 363 KLGGIDQVATCQPF--FEPRGEQDPH--SSFWVARRRN--QGDATAMSIRVVDRDLELID 416
           +  G+ Q    QPF  F+ + E+     + ++  R R    GD     +  V  D + + 
Sbjct: 342 RARGVPQ--RYQPFESFQHQIERAKGRLALYYRIRVREAVSGDGFDHLLSFVRGDEKQVI 399

Query: 417 ASSDTLSIGLTCSNRDVPLMLPFGGERGDFTIPANS--VIKDIRCLRKPTATVRVPLGKG 474
              +++S+ LTC+NR     LP G       +P  +       R L +P+  +R  L   
Sbjct: 400 DLDESISVSLTCTNRSRAAQLPVGA----ICVPTGNSPSFATFRNLIRPSRPLRPALDGS 455

Query: 475 LIWRLIAHLSLNHLSLVSQGREVLLELLSLYNY------RNVSAIRKQINGIKAISSEPV 528
           L W LI++LSLN++SL+   R+ L+++L  Y++      +   A RK++ GI+ I + PV
Sbjct: 456 LHWTLISNLSLNYVSLLR--RDALVQILRTYDFPALHDKQAEQASRKRLAGIETIETTPV 513

Query: 529 VARI-GHPRPNFVRGVGITLTLDESQFIGSG-VFLFGRVLDHFFGQYCSMNSFTQLTLRT 586
              + G P    VRG+   L++ +S F   G ++LF  VL HFF  Y S+N+F  L +  
Sbjct: 514 DRLVQGMP----VRGLKSVLSVRQSAFASEGELYLFSTVLAHFFSLYASVNAFHLLEVVN 569

Query: 587 QQREKRVVQWPARTGDQPLV 606
              ++R  +WP + G   ++
Sbjct: 570 IDNKER-YRWPVQIGQHSMM 588