Pairwise Alignments

Query, 878 a.a., Protein ClpV1 from Pseudomonas putida KT2440

Subject, 873 a.a., Chaperone protein ClpB (ATP-dependent unfoldase) from Variovorax sp. SCN45

 Score =  494 bits (1272), Expect = e-144
 Identities = 330/864 (38%), Positives = 473/864 (54%), Gaps = 64/864 (7%)

Query: 22  KLNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVVAERLQAQL 81
           KL    + A   A +L L   +  +E  HLL  +L  +D   A + R    V    QA  
Sbjct: 5   KLTTKFQEALGDAQSLALGNDNAYIEPAHLLAAMLRQDDGPRALLERAGVNVPGLTQA-- 62

Query: 82  VTALGTFKKGNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLDDAELRRVV 141
             A    KK     P +  H          +  +   +G+     LLQA   +A ++R  
Sbjct: 63  --AEAAIKK----LPQVQGHD---------IVQVGPELGK-----LLQATEKEA-IKRND 101

Query: 142 IASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVS---TSSKASGKTPALDQ 198
              A EL  +   D + ++    + +  SR++   A  A        S+ A G+  AL +
Sbjct: 102 QFIAGELFLLALADSKADIGKTAKENGLSRKSLEAAIDAVRGGQGVNSADAEGQREALKK 161

Query: 199 YTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLALRI 258
           Y ++LT+ AR G++DPV+GR+ E+R+ + +L RR +NNP+L GE GVGKTA+VEGLA RI
Sbjct: 162 YCMDLTERARLGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI 221

Query: 259 AQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFIDEAHTL 318
             G+VP  LK   + +LD+  L AGA  +GEFE RLK V+ E+ +     I+FIDE HT+
Sbjct: 222 VAGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERLKTVLNELAKDEGQTIVFIDELHTM 281

Query: 319 IGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPDE 378
           +G+G   G  DA N+LKPALARGEL  + ATT  EY+KY EKDAAL RRFQ + V EP  
Sbjct: 282 VGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVGEPSV 341

Query: 379 DKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTACARIAL 438
           +  I +LRGL  K   HH V + D A+V A  LS+RYIT R LPDKA+ ++D A A+I +
Sbjct: 342 EATIAILRGLQEKYEVHHGVQITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAAAKIKI 401

Query: 439 AQSSLPGALEDCRRQIDNLQAEIDVLGHEAGKGHDHARRLESLQAALQAEQQQEQQLNAQ 498
              S P  ++   R++  LQ E + +  E  K     +RL  ++  +   Q++    +  
Sbjct: 402 EMDSKPEVMDRLDRRLIQLQIEREAVRRE--KDEASQKRLGLIEDEIVKLQKEIADYDEI 459

Query: 499 WQQE------------------LELVEQLKALDAANDADAQ--QLNTLRAELARVQGDQ- 537
           WQ E                   ++ E  +  D    A+ Q  QL  L   L   +  + 
Sbjct: 460 WQAEKAQAQGSAQVREDVDKIKFQIEEWKRKGDFNKVAELQYGQLPALEKRLKEAEASEA 519

Query: 538 --------PLVHALVDSGAIAQVISGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHA 589
                    L+   V S  IA+V++  TGIP+ K+++ E D +  +   L ERV+GQD A
Sbjct: 520 SKGKSSAPTLLRTQVGSEEIAEVVARATGIPVAKLMQGERDKLLVMEDKLHERVVGQDEA 579

Query: 590 LHEIGKRIKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSE 649
           +  +   I+ SR+ + DPN+P G FL LGP+GVGKTE   ALA  L+  E +LI I+MSE
Sbjct: 580 IGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSE 639

Query: 650 YQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDK 709
           + E H+V+ L G+PPGYVGY EGG LTEAVRRKPYSVVLLDEVEKAHPDV  +  QV D 
Sbjct: 640 FMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDD 699

Query: 710 GVLDDGEGREINFRNTVIILTSNTGTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPA 769
           G L DG+GR ++F+NTVI++TSN G+  I+Q  +        E I E + D+L + F+P 
Sbjct: 700 GRLTDGQGRTVDFKNTVIVMTSNIGSP-IIQAMVGKPS----EEIKEAVWDELKNYFRPE 754

Query: 770 FLGRL-SIVPFYPVQDQILERIVALKLERIAKRFARNHQAELSYDQALVKAIAARCTEVD 828
           FL R+   V F+ +  + +E I A++L+ +  R A+     L    A +  IA    +  
Sbjct: 755 FLNRIDETVVFHALDAKNIESIAAIQLKVLQARLAK-MDLGLEVSPAALAEIAKVGFDPV 813

Query: 829 SGARNIDNILSQTLMPELAQRVLE 852
            GAR +   + Q +   L++ +L+
Sbjct: 814 FGARPLKRAIQQRIENPLSKLLLD 837