Pairwise Alignments

Query, 878 a.a., Protein ClpV1 from Pseudomonas putida KT2440

Subject, 679 a.a., Chaperone protein ClpB (ATP-dependent unfoldase) from Sphingobium sp. HT1-2

 Score =  482 bits (1241), Expect = e-140
 Identities = 293/669 (43%), Positives = 397/669 (59%), Gaps = 32/669 (4%)

Query: 226 VDILTRRRQNNPILTGEAGVGKTAVVEGLALRIAQGDVPAVLKDVALHTLDLGLLQAGAG 285
           V IL RR +NNP L GE GVGKTA+ EGLALRIA GDVP  L+D  L  LD+G L AGA 
Sbjct: 1   VQILARRTKNNPALMGEPGVGKTAIAEGLALRIANGDVPESLRDRRLMALDMGSLIAGAK 60

Query: 286 VKGEFENRLKAVIEEVKRSLHPIILFIDEAHTLIGSGGQAGQNDAANLLKPALARGELRT 345
            +GEFE RLK+V++EVK +   IILFIDE HTLIG+G   G  DA+NLLKPALARGEL  
Sbjct: 61  YRGEFEERLKSVLDEVKGAEGDIILFIDEMHTLIGAGKGEGAMDASNLLKPALARGELHC 120

Query: 346 IAATTWAEYKKYFEKDAALARRFQVVKVEEPDEDKAIHMLRGLLGKMREHHKVAVMDEAL 405
           I ATT  EY+KY EKD AL RRFQ V V EP  +  I +LRG+      HH V + D A+
Sbjct: 121 IGATTLDEYQKYVEKDPALQRRFQPVFVGEPTVEDTISILRGIKENYELHHGVRIADNAI 180

Query: 406 VQAVRLSNRYITGRQLPDKAVSVLDTACARIALAQSSLPGALEDCRRQIDNLQAEIDVLG 465
           V A  LSNRYI  R LPDKA+ ++D A +RI +   S P  +E   R+I  L+ E   L 
Sbjct: 181 VAAATLSNRYIADRFLPDKAIDLMDEAASRIRMEVESKPEEIEGLDRRIIQLKIEEQALA 240

Query: 466 HEAGKGHDHARRLESLQAALQAEQQQEQQLNAQWQQELELV-------EQL--------K 510
            E  +      RLE+L+  L   +QQ  +L  +WQ E + +       EQL        +
Sbjct: 241 KETDQA--SRDRLEALREDLANLEQQSAELTTRWQNERDKIASEGKIKEQLDAARVELEQ 298

Query: 511 ALDAANDADAQQLNTLR-------AELARVQGDQPLVHALVDSGAIAQVISGWTGIPLGK 563
           A  A + A A +L   R        E A+ Q +  L+   V S  IA V+S WTGIP+ +
Sbjct: 299 AQRAGDYAKAGELTYSRIPALEKSLEDAQGQSNNALLREEVTSEDIAAVVSRWTGIPVDR 358

Query: 564 MLRDEIDTVQRLPALLGERVLGQDHALHEIGKRIKISRARMEDPNKPIGVFLLLGPSGVG 623
           M+  E D + ++  ++G+RV+GQ  A+  + K ++ +RA ++DPN+P+G FL LGP+GVG
Sbjct: 359 MMEGERDKLLKMEEVIGKRVIGQKDAVLAVSKAVRRARAGLQDPNRPLGSFLFLGPTGVG 418

Query: 624 KTETALALADTLYGGERNLITINMSEYQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKP 683
           KTE   ALA  L+  +  ++ I+MSE+ E H+VS L G+PPGYVGY EGGVLTEAVRR+P
Sbjct: 419 KTELTKALAGFLFDDDAAMVRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGVLTEAVRRRP 478

Query: 684 YSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFRNTVIILTSNTGTERIMQTCL 743
           Y VVL DEVEKAH DV  +  QV D G L DG+GR ++F NT+IILTSN G+    Q   
Sbjct: 479 YQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRVVDFTNTLIILTSNLGS----QFLA 534

Query: 744 NATELPTPEAIVEDLRDQLNHVFKPAFLGRL-SIVPFYPVQDQILERIVALKLERIAKRF 802
           N  +    E +   + D +   F+P FL RL  I+ F+ +  + +  IV +++ R+ K  
Sbjct: 535 NLGDGEDVEKVEPQVMDVVRGHFRPEFLNRLDEIILFHRLGQEHMGPIVEIQVARVGK-L 593

Query: 803 ARNHQAELSYDQALVKAIAARCTEVDSGARNIDNILSQTLMPELAQRVLERMAQDAPIQH 862
            ++ +  L   +A  + +     +   GAR +   + + L   LA+++L     D     
Sbjct: 594 LKDRKITLDLTEAAERWLGRIAYDPVYGARPLKRAVQRYLQDPLAEKLLAGEIPDG--AR 651

Query: 863 LAIELGSDG 871
           + I+ G DG
Sbjct: 652 VRIDEGDDG 660