Pairwise Alignments

Query, 878 a.a., Protein ClpV1 from Pseudomonas putida KT2440

Subject, 892 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

 Score =  688 bits (1775), Expect = 0.0
 Identities = 393/861 (45%), Positives = 544/861 (63%), Gaps = 12/861 (1%)

Query: 14  VNLKSLFAKLNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVV 73
           ++L  L   L    R   E+AA++ +   H  V++ H LL ++D      A      ++ 
Sbjct: 4   IDLNRLVGALEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVVDAGI--YAETFDELKIP 61

Query: 74  AERLQAQLVTALGTFKKGNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLD 133
              L+A++  +L     G+    +LS +I     +AW+LAS+E G  +V    LL A+ +
Sbjct: 62  LPVLKAEIGRSLEEAIIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMDE 121

Query: 134 DAELRRVVIASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVSTSSKASGKT 193
           +  LR  V ++ P L+ ++   L   L +  E  A     S L S     + S++A+G+ 
Sbjct: 122 ETSLRSFVRSAFPSLKAMDRGALE-RLRSSAENGAGVDVPSALTSSGE--AGSAQAAGQN 178

Query: 194 PALDQYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEG 253
             L  YT ++T  AR G++DPV+GR+ E+RQ+VDILTRRRQNNPIL GEAGVGKTAV E 
Sbjct: 179 DFLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVGKTAVAEA 238

Query: 254 LALRIAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFID 313
           LAL IA G+VP  L++V L  LD+ LLQAGAGVKGEFE RL  VI+ VKRS  P+ILFID
Sbjct: 239 LALEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAEPVILFID 298

Query: 314 EAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKV 373
           EAH L+G+GG AGQ DAAN+LKPALARGE+RT+AATTW+EYKKYFEKDAAL RRFQ V V
Sbjct: 299 EAHGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTRRFQPVHV 358

Query: 374 EEPDEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTAC 433
            EPDE  AI MLRG+      HH V V DEA+V AV+LS RY+  RQLPDKAVS+LDTA 
Sbjct: 359 REPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPDKAVSLLDTAA 418

Query: 434 ARIALAQSSLPGALEDCRRQIDNLQAEIDVLGHEAGKGHDHARRLESLQAALQAEQQQEQ 493
           A ++LA+ +LP  L     +   L  E++ L  E  +  D   R++S++  L+  +    
Sbjct: 419 AAVSLARQTLPERLRAMESERHLLSDELNWLLREP-QDEDMQNRIQSIRDELERLEAGID 477

Query: 494 QLNAQWQQELELVEQLKALDAANDAD--AQQLNTLR-AELARVQGDQPLVHALVDSGAIA 550
            L  ++  E+    +L AL     A+  A  ++ LR A   R    + LV  +VD  AIA
Sbjct: 478 DLRGRYDAEM---AELAALSEEQPAETGASNVSHLRPATEMRPANAERLVPTVVDREAIA 534

Query: 551 QVISGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIGKRIKISRARMEDPNKP 610
            V+S WTGIPLGK+L D+I++ + L   + +RV+GQD A+  I   ++ +RA + DP +P
Sbjct: 535 AVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDAAITRIADAMRTARAGLSDPRRP 594

Query: 611 IGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHTVSSLKGSPPGYVGYG 670
             VF L+G SG GKTETAL+LAD LYGG  +L TINMSE++E H VS L GSPPGYVG+G
Sbjct: 595 PAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSEFKEEHKVSLLLGSPPGYVGFG 654

Query: 671 EGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFRNTVIILT 730
           EGGVLTEAVRR+P+ V+LLDE++KAHP V ++F+QVFDKGVL DGEGR+++F+NT I +T
Sbjct: 655 EGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDKGVLRDGEGRDVDFKNTTIFMT 714

Query: 731 SNTGTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFLGRLSIVPFYPVQDQILERI 790
           +NTG+E +     +   +P  EA+   L  +L   FKPAFLGR  I+PF P+  + L  +
Sbjct: 715 ANTGSELLSALSADPDTMPEGEALEALLMPELTKQFKPAFLGRTIILPFMPLGAEELASV 774

Query: 791 VALKLERIAKRFARNHQAELSYDQALVKAIAARCTEVDSGARNIDNILSQTLMPELAQRV 850
           V +++ +I  R    +  +L    A   A+ AR    + GAR I+ ++ + L+P L+   
Sbjct: 775 VDMQIGKIRDRVLATYGTDLRLSDAARDALVARAGASEIGARAIEIMIGKDLLPPLSSFF 834

Query: 851 LERMAQDAPIQHLAIELGSDG 871
           LE++     +  + ++ G +G
Sbjct: 835 LEKVIAGERVGKIVVDFGENG 855