Pairwise Alignments

Query, 447 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 448 a.a., type VI secretion system baseplate subunit TssK from Paraburkholderia sabiae LMG 24235

 Score =  143 bits (361), Expect = 1e-38
 Identities = 128/455 (28%), Positives = 203/455 (44%), Gaps = 19/455 (4%)

Query: 1   MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAEATLRSTPFHWGVQALQVDEDALANGSL 60
           MS  ++V WSEG+FL PQ FQ Q+ + +H   +     +PF +G     +D +ALA G +
Sbjct: 1   MSWYNKVTWSEGLFLRPQLFQQQERYLEHFAHKRAAPLSPFFFGFSHYAIDAEALALGKV 60

Query: 61  QLKRLKLVFPDGSLYDAPQHDPLPAARDLKDLLKANDLKVYAALKLPEPFGLNYVEDGHE 120
            +K    VF DG+ +DAP + P PA   ++   +  D  ++ A+ +  P       D   
Sbjct: 61  IVKSASGVFADGTPFDAPGNTPPPAPLTIRS--EHLDQVIHLAVPIRVPNAEETTFDESP 118

Query: 121 HKAARRFRKQFDT-LPDLN---EGELENEITSLRLNVVLLVDGDSLDGYSHCPLAKL-TR 175
           H  AR     FDT L D N   +G    ++++LRL   LL   +  D +   PL ++ T 
Sbjct: 119 HSLAR--HSVFDTDLRDTNSIGQGPKTVQLSNLRLR--LLPQKELTDAWIGLPLTRVKTL 174

Query: 176 NSMGGFNLDPHFVHPTLHLGSHETIAGIGKRLLGALQAKSKALSGRRRERADQIAEFGSS 235
            + G   LD   V P    G+   ++    ++    + ++ AL+ R      Q      +
Sbjct: 175 RADGSIELDDTLVPPVAGYGASTLLSSWLAKVHDLTRLRADALARRLTGSDGQAGTV--A 232

Query: 236 DVTLFWLLNTVNRAHPQLAHLLAHPRLHPERLYLFLADLAGGLLTFT-LDTQ--LSDIPE 292
           +V+ + LL T+NR  P L HL   P   P  +Y  L  +AG L T+  L+T+  L   P 
Sbjct: 233 EVSDYLLLQTLNRYEPLLQHLRRVPTTSPADVYALLLGMAGELSTYVRLETRRPLDSHPP 292

Query: 293 YDHHDPAASLVKLDEMIRVMLDNVVPNQCIVINLTQTKPSHWQGQLHDPRLAEA--DFYI 350
           Y H +P   L  L +    +L+ V+      I   +      +  + DP    +     +
Sbjct: 293 YQHIEPHLCLKPLVDDTHWLLNAVLIRSAQSIPFAEAGYG-MRNAVVDPAEMRSFNSLVL 351

Query: 351 AVHADMPGASLLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHAARLPNAIPVRLDNQYFA 410
           AV A MP  +L++      KVG  E +  +V S +PG+ L      P  IP      Y+ 
Sbjct: 352 AVSAQMPPDTLVQQFATQAKVGPSERLPDLVRSHLPGIALQALPVPPRQIPFNAGYVYYE 411

Query: 411 IEPHGTVYERMISAQAICFYAPSAFTNLKLELMAV 445
           +   G ++E +     I  +    F  LKLEL  V
Sbjct: 412 VSRTGPLWEAVAQYGGIALHVAGDFPGLKLELWGV 446