Pairwise Alignments

Query, 1267 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 1111 a.a., type VI secretion protein VasK from Pseudomonas simiae WCS417

 Score =  138 bits (348), Expect = 2e-36
 Identities = 147/576 (25%), Positives = 247/576 (42%), Gaps = 93/576 (16%)

Query: 7   LLKSFWLLLPLLWLASLLICWLAAPLV----------PWLRHHVPEALAIISACFLLVIV 56
           +L+  W+   LL L+  L+ W   PL+          P  R      L ++    ++ + 
Sbjct: 11  VLRKSWVYSLLLVLSCALLVWFFGPLLAVDDYRFWQSPTSRLLTISGLLLLWGLAMVGMG 70

Query: 57  LRQYQRIRA-----EHNLENLLQIEVDRSWNATGEFRDQQVLRERLKHAITMLRTDRSAG 111
            R+  R+        H    L+  E+ +             +R R K A+  L+T R  G
Sbjct: 71  ARRTARLNQPEEHERHQRRALINEEIRQ-------------VRARFKEALQALKTSRRYG 117

Query: 112 GGGKAALSDLPWYLVVGMSAAGKTSLLTHSGLSASIATANDSESGTQH-CDWYFSPDAVM 170
              +    +LPWYL++G   +GKTSLL  SGL +     + +  G    CDWYF+ DAV+
Sbjct: 118 ERSERWRDELPWYLLIGEQGSGKTSLLAASGLPSPFDHPDAAPLGAASWCDWYFAEDAVL 177

Query: 171 IDTAGRYL-RDDQS--ASEFSAFLRMLRKQRGKAAINGLVLVVSLPELLAANSDERNALA 227
           ++ AGRYL + D S  A+ +S  L +L+ +R    +NG+V+ +S   L ++N  +    A
Sbjct: 178 VEAAGRYLGQPDPSVDAAGWSTLLDLLKWRRRSRPLNGVVVTLSADTLSSSNEHDLERHA 237

Query: 228 AQLVARVEEYAECLDANPPVYLMLSKTDQLPGFSQAFDGLDLHERQQPLGMTFG--LSEI 285
             +  R+++  + L  + PVYL+L+++D+L GF++ FD       +Q LG   G  L+++
Sbjct: 238 RHVRTRLQDIQQTLHVDVPVYLVLTQSDRLAGFAEFFDAQQGDGTEQVLGGDLGTDLAQV 297

Query: 286 RTNGLHAVLQTRLKKLQAHIRQHVDAQMIALGAEADSTLLNFPQYFAALSGVLEQFLEHF 345
           R      V +  L++L   +   +  +      E    +L+FP+  A +   L  F+E  
Sbjct: 298 RD-----VFENLLQRLGGDLIPRLHQER---NVERRGHMLDFPRQVARIGDALCLFIEAA 349

Query: 346 TRGHRGGAPLLLRGLYFTSALQNGQQLGQVYEDVIADEFALQAAYDEQAGHVGKALGNRS 405
              +R      LRG Y T A                                 K +  R 
Sbjct: 350 FSVNRNQPINALRGFYLTCA---------------------------------KTVDVRP 376

Query: 406 YFITDTFRQVIFPDRD----LILYQSRLGRQAAFSPLLLGLAAATGLLFIGWQALSFANN 461
           +F+   F++VIF + D    L   + R+ R+  +  + L      G +   W A S++ N
Sbjct: 377 HFVQGLFKRVIFAEADQAGLLTPERQRIHRRHGW--MALAATVVIGTVGAVW-AHSYSFN 433

Query: 462 RQWLDSLRGQLAHIE----QAADREQQLAAGKGLEVLREQMANVKAHRLQGVPLQLG-GG 516
            Q L  L G L H +      AD    L     L +L  ++A  +    Q     +   G
Sbjct: 434 HQRLLQLTG-LIHTQTGTPPGADESHAL-----LTLLDSRLAATQVFSPQAQARWIDRAG 487

Query: 517 LYQGEAIHQVTRSAYLAQLRSQALEPIARSLQVQMR 552
           LYQG        +AY   L+ + L  +A  L+ ++R
Sbjct: 488 LYQGALSIAPLAAAYEHTLQQRFLPYVATVLEGRVR 523



 Score = 68.9 bits (167), Expect = 2e-15
 Identities = 139/652 (21%), Positives = 255/652 (39%), Gaps = 92/652 (14%)

Query: 597  RAGAYAAKVNLATASDGAELSAATGGLSLSEEMLGRLDEQQVASIIEAYNTLKLYLLLTE 656
            RAG Y   +++A  +   E +     L     +L       +    +  + L+ YL+L  
Sbjct: 485  RAGLYQGALSIAPLAAAYEHTLQQRFLPYVATVLEGRVRGSLGDREQLLDNLRAYLMLNL 544

Query: 657  PQAHPDPAFVAASLPQAWASAAGEGTPADAGVIAENAPLYVQLLEQGQAPSL-PRNEQLI 715
             +   D A++A  +   W+         D+         + +LLEQ   P L P +E L+
Sbjct: 545  RERR-DNAWLAEYVSGQWSG--------DSSANKRLNEHFARLLEQ---PFLAPLDEALV 592

Query: 716  NETRQNLKSFMISSSLVDREYLRLQLESSRQFPALSLNDLVPQPGRALLYGTAGVPAIYT 775
               R  L+      SL +  Y  L+ E +R      L +     G A       +P  YT
Sbjct: 593  ARARLVLRG----ESLAEVVYRALR-EQARNVEPYPLAE-----GPAFSRVEPPIPGFYT 642

Query: 776  RQGWDTFVKP--ELIKLVSGNLRNESDWVLDGEGGD---ALVQKANFVREFMTRYKRDYT 830
            R+    F +   +++  ++     + +WVL GEGGD   A +++   V E   RY  +Y 
Sbjct: 643  RKYLQLFEQQGTQMVHAIA-----QDNWVL-GEGGDLGAADLRRLMLVLE--QRYFSEYA 694

Query: 831  QAWYKMVSSVGVRHFADLASATRELGLLSDVQNSPVKNLLQAVNDNTQWDLPVKQAIPAP 890
              W   +  + +R    L      L  L+  Q++ V+ LLQ V +NT+            
Sbjct: 695  DVWSDALGRIRLRESGSLQQGAEYLASLTSAQSALVQ-LLQQVRENTRL----------- 742

Query: 891  GTSRDDGFWSKVTGLFDANDTLPANVAPA-LPAVDDGSLAKRFEPVARVFAENNAEGADS 949
              S  D   + V  +         ++A A LP     +L +RFEP+ ++  E    G + 
Sbjct: 743  -VSVSDRLETAVQPVAGLGAVTSRSLARAGLPDNARRALQRRFEPLHQLLDEQQNPGGEL 801

Query: 950  TIMDRYLAALRKLKVRMNNIQRSQDVGKSSKQLISETLEGQPSEITTVRNYVESSVDTSQ 1009
            T   + L  L +L+++++ + R     +++ ++  + ++GQ   +  +R       DT+ 
Sbjct: 802  T---QALRLLDELQLQLSAVSRDSSPEQAAFKMARQRMDGQQPLLGNLR-------DTAA 851

Query: 1010 DGLSRSLQGLFSLPIQYAWATLRDPAGEQIAKAWAQQIAKPWEQVMAHRYPIAGSSRNEA 1069
                + L+G F      +W  L D A   + + +  ++   + + +  RYP    + ++ 
Sbjct: 852  -RFPQPLKGWFEGIADQSWRQLLDDAYGFVNQHYQNEVYGFYAKAIQRRYPFDAHAGSDV 910

Query: 1070 SVKDLQRFVDPDSGLLPAFKRNEIGNLAGGEG-----LGVGDGKGPALVNPGMLNSIDKA 1124
            ++ D Q F  P  G +  F  + +      EG      G+     P  ++  +L  + +A
Sbjct: 911  ALGDFQAFFKP-RGAMARFYESYLRPFVIVEGNRYRLRGIEGRSLP--MSRSLLEQLTRA 967

Query: 1125 SSVGQVIASLSDRDNGFEIMLEPSANFTDIVFTLD-----------GQEQHYRNGRSSWN 1173
              + Q        D G     E +  FT   ++LD            Q+  YR+G     
Sbjct: 968  QIIRQ---GFFTEDQG-----ELAVRFTLAPYSLDQAVSRATLRVGDQQLEYRHGPIVPV 1019

Query: 1174 RFAWPGTSTAPGARLDVVTLSGTR--VTVFDFPGRWGLLRMNESARVDDLDG 1223
             F WP  + A   R  +V   G    + +    G W L R  +  + +   G
Sbjct: 1020 AFHWP--NEAENGRSSLVLERGAERPLGIEKDSGAWSLFRFFDLMQSEPASG 1069