Pairwise Alignments

Query, 1267 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 1219 a.a., T6SS component TssM (IcmF/VasK) from Variovorax sp. SCN45

 Score =  171 bits (434), Expect = 3e-46
 Identities = 166/606 (27%), Positives = 264/606 (43%), Gaps = 64/606 (10%)

Query: 1   MKTLLRLL--KSFWLLLPLLWLASLLICWLAAPLVPWLRHHVPE-------ALAIISACF 51
           ++ + R L  +  W+ L L+ LA L+  W+  P +   R+   E        +A++ A +
Sbjct: 2   LRAIFRFLIGRDLWVFLGLVALAFLI--WIIGPAIAVGRYRPLEDEIVRIAVIALMFAIW 59

Query: 52  LLVIVLRQYQRIRAEHNLENLLQIEVDRSWNATGEFRDQ-QVLRERLKHAITMLRTDR-S 109
           L  +V R+++  R    L N L+    +   A  E   + + L+     A  +L+  R  
Sbjct: 60  LARLVYRKWRERRLNAQLLNQLRTPSKKEKEAKPEDAPEIKELQSGFTDATAILKNMRFG 119

Query: 110 AGGGGKAA----------LSDLPWYLVVGMSAAGKTSLLTHSGLSASIA-----TANDSE 154
            G  GK A          L  LPWY+ +G   +GKT+ L +S L   +A      A    
Sbjct: 120 QGADGKPASRFSVFDRQYLYQLPWYIFIGAPGSGKTTALVNSDLDFPLADQLGKAAVRGI 179

Query: 155 SGTQHCDWYFSPDAVMIDTAGRYLRDDQSAS----EFSAFLRMLRKQRGKAAINGLVLVV 210
            GT++CDW+F+ +AV+IDTAGRY   + +      E+  FL +L+K R +  ING +L +
Sbjct: 180 GGTRNCDWWFTNEAVLIDTAGRYTTHESNRETDEGEWKGFLELLKKFRPRQPINGAILTI 239

Query: 211 SLPELLAANSDERNALAAQLVARVEEYAECLDANPPVYLMLSKTDQLPGFSQAFDGLDLH 270
           S+ +L  A+  +R   A  L  R+ E    L  + PVY++++KTD L GF++ F  L   
Sbjct: 240 SIADLPLADDAQRARHAMALRKRLLELRNDLGIDFPVYVLVTKTDLLAGFNEYFGSLGRA 299

Query: 271 ERQQPLGMTFGLSEIRTNGL--------HAVLQTRLKKLQAHIRQHVDAQM-IALGAEAD 321
           ERQQ  G TF +     N             L+ R  +    + Q +D ++   L AE D
Sbjct: 300 ERQQVWGFTFPIEGNAANKAAKGAAPLKGGDLRERFHQEYRLLHQRLDERLPELLAAEPD 359

Query: 322 ----STLLNFPQYFAALSGVLEQFLEHFTRGHRGGAPLLLRGLYFTSALQNGQQLGQVYE 377
               +     PQ FA+   +L  FL       +  A  +LRG+YFTS  Q G    +V  
Sbjct: 360 PMRRAQAYLLPQQFASFEDILGTFLADVFNPSKFEAASMLRGVYFTSGTQEGTAFDRVMG 419

Query: 378 DVIADEFALQAAYDEQAGHVGKALGNRSYFITDTFRQVIFPDRDLILYQSR-LGRQAAFS 436
                  A++      A         +SYF+ +  +QVIF D  +     R   R+ A  
Sbjct: 420 -------AIKRYLQVNAPPAPPPGPGKSYFLKELLQQVIFRDAGVAGTNLRWYRRKRAID 472

Query: 437 PLLLGLAAATGLLFIGWQALSFANNRQWLDSLRGQLAHIEQAADR-EQQLAAGKG----- 490
                +     +LF+G    S+ NN+ ++  + G      +AA R E       G     
Sbjct: 473 IAGYSVIGVLLVLFLGACVNSWRNNKDYVAEVDGNAKAFNKAAARGELPTVVDSGGDIAS 532

Query: 491 ----LEVLREQMANVKAHRLQGVPLQLGGGLYQGEAIHQVTRSAYLAQLRSQALEPIARS 546
               L+ LR+ +       +   PL    GLYQGE +   T   Y   L +  L   A+ 
Sbjct: 533 SLLILDRLRD-LPKSSHFDVSDPPLSYRFGLYQGEKLQAATDGVYQRALETVLLPQAAQR 591

Query: 547 LQVQMR 552
           ++  +R
Sbjct: 592 VEQSLR 597



 Score = 79.0 bits (193), Expect = 2e-18
 Identities = 147/656 (22%), Positives = 250/656 (38%), Gaps = 98/656 (14%)

Query: 613  GAELSAATGGL---SLSEEMLGRLDEQQVASIIEA--------YNTLKLYLLLTEPQAHP 661
            G +L AAT G+   +L   +L +  ++   S+ EA        Y  LK YL+L + + + 
Sbjct: 565  GEKLQAATDGVYQRALETVLLPQAAQRVEQSLREASKNDAEYSYEALKAYLMLFDAERYD 624

Query: 662  DPAFVAASLPQAWASAAGEGTPADAGVIAE---NAPLYVQLLEQGQAPSLP--RNEQLIN 716
                  A   QAW  +  +     A +  E   N   +++ L  G+  + P  ++E+LI 
Sbjct: 625  ------ADFLQAWLLSDVD-RKIGASLTREQRTNLESHLKALFAGRVLTSPFAKDERLIT 677

Query: 717  ETRQNLKSFMISSSLVDREYLRLQLESSRQFP--ALSLNDLVPQPGRALLYG------TA 768
            +TR+ L        L  R Y RL+    +  P  A S+ +        ++        T 
Sbjct: 678  QTRERLAGV----PLAQRSYARLRRILLQTSPPNAFSIAEAGGAESALVIRRASGKPLTD 733

Query: 769  GVPAIYTRQG-WDTFVKPELIKLVSGNLRNESDWVLD--GEGGDALVQKANFVREFMTRY 825
            G+P ++T +G WD F K      +S  L  E  WVL     G   +  +   +RE    Y
Sbjct: 734  GIPTLFTYRGYWDIFDKRMAETTLS--LEQEDRWVLQIRAPGIADITSRELLLREVRRLY 791

Query: 826  KRDYTQAWYKMVSSVGVRHFADLASATRELGLLSDVQNSPVKNLLQAVNDNTQWDLPVKQ 885
              DY + W + ++ + +     L  + +   +LS    SP+  +++     T  DL    
Sbjct: 792  LTDYIRVWDEYLTDIRLADSRSLLQSIQMTRVLS-TSESPMSRIIRGAARET--DLL--- 845

Query: 886  AIPAPGTSRDDGFWSKVTGLFDANDTLPANVAPALPAV---DDGSLAKRFEPVARVFAEN 942
                   + D+       GL D      A+    +  +    DGS  +     ARV    
Sbjct: 846  ------RNHDEA----ARGLLDQAQNRVASTRERIEQLIGQPDGSQRRN----ARV---- 887

Query: 943  NAEGADSTIMDRYLAALRKLKVRMNNIQRSQDVGKSSKQLISETLEGQPSEITTVRNYVE 1002
                   +++D +   LR++       Q  Q    ++  LI+E      +  T +R+   
Sbjct: 888  ---DRPESLVDNHFEPLRRMVTAPK--QGGQAPIDATAALINELYTFLTATDTALRS--- 939

Query: 1003 SSVDTSQDGLSRSLQGLFSLPIQYAW------ATLRDPAG----EQIAKAWAQQIAKPWE 1052
             ++  S D +++       LP+ +        AT    A     + I ++ A  I     
Sbjct: 940  GNIPPSSDAVTKVQAEAGRLPVPFQGMLNDLSATASSKAAAVTRQNIGQSAAASIGSFCN 999

Query: 1053 QVMAHRYPIAGSSRNEASVKDLQRFVDPDSGLLPAFKRNEIGNLAGGEG-----LGVGDG 1107
            Q +A RYP +  S  + +  D  +   P   +   F++N I  +           GV   
Sbjct: 1000 QAIAGRYPFSRGSNRDVASGDFAQLFAPGGMMDDFFQKNLITQVDTSVNPWAFKRGVD-- 1057

Query: 1108 KGPALVNPGMLNSIDKASSVGQVIAS--LSDRDNGFEIMLEPS---ANFTDIVFTLDGQE 1162
             G A      L+S  KA ++  V  S     R   F + + P    A  T     +DGQ 
Sbjct: 1058 -GSAAGRSAYLDSFQKAQAIRDVFFSGMAGGRTPSFTLDIRPEDMDAALTQFTLDIDGQT 1116

Query: 1163 QHYRNGRSSWNRFAWPGTSTAPGARLDVVTLSGTRVTVFDFPGRWGLLRMNESARV 1218
              Y +G  + +   WPG   +   RL V T +GT        G W L R+ + A +
Sbjct: 1117 VRYAHGPQAPSTVKWPGPRNSNQVRLQVTTANGTPAGGIVTEGPWALHRLFDKASI 1172