Pairwise Alignments

Query, 1267 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 1208 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  130 bits (328), Expect = 5e-34
 Identities = 156/601 (25%), Positives = 250/601 (41%), Gaps = 94/601 (15%)

Query: 13  LLLPLLWLASLLICWLAAPLVPW--------LRHHVPEALAIISACFL--LVIVLRQYQR 62
           LLL L  +  L+  W   P   W        + H    +L  +    L  LV++  +++R
Sbjct: 25  LLLGLGAVLMLVAIWWLGPQWTWRDQQPLASVAHRSMASLVFVLVALLSWLVVLRTRFRR 84

Query: 63  IRAEHNLENLLQIEVDRSWNATGEFRDQQVLRERLKHAITMLRTDRSAGGGGKAALSDLP 122
           ++AE       +++  + +    E    Q L   L +A            GG+ AL  LP
Sbjct: 85  LQAERQQAMAAEVDPTQPFVHAQEKALSQGLARYLDNA------------GGRRALYRLP 132

Query: 123 WYLVVGMSAAGKTSLLTHSGLSASIATANDSESGTQHCD-------WYFSPDAVMIDTAG 175
           WYLV+G   AGK+S +  +  S S+   + +++  +          W+ S DAV+ID  G
Sbjct: 133 WYLVLGARQAGKSSFIDCTDQSFSLTRIDKAQARGRPAQALAYPVGWWISNDAVIIDPPG 192

Query: 176 RYLRDDQSASEFSA--------------------FLRMLRKQRGKAAINGLVLVVSLPEL 215
            ++  +  A    +                     L  L++ R + A+NGLVLVV LP L
Sbjct: 193 AFISQNGPADSLGSDSTDVESSVPSGTQAKLWQHLLDWLQRNRSQRALNGLVLVVDLPAL 252

Query: 216 LAANSDERNALAAQLVARVEEYAECLDANPPVYLMLSKTDQLPGFSQAFDGLDLHERQQP 275
           L    ++R ALA  L  R+ E +  L +  P+Y++LSK D L GF Q +  L   +R   
Sbjct: 253 LHGTVEQRTALAHLLRTRLYEVSSQLGSRLPLYVVLSKFDLLDGFDQFYSKLSAAKRNSL 312

Query: 276 LGMTFGLSEIRT----NGLHAVLQTRLKKLQAHIRQHVDAQMIALGAEADSTLLNFPQYF 331
            G TF L  + T     G +     RL  L+    Q +D   +       S L +  +  
Sbjct: 313 FGFTFKLDAVDTFDAWLGEYGEHYDRL--LEQLFEQVIDRLDVQGSPALRSRLYSLHRQL 370

Query: 332 AALSGVLEQFLEHFTRGHRGGAPLLLRGLYFTSALQNGQQLGQVYEDVIADEFALQAAYD 391
             L  +L  FL       R   P L+RG+Y++S +Q+G          + + F  +AA  
Sbjct: 371 LGLRPMLLSFLRETLASDRFTTPALVRGVYWSSVVQHGD---------VRNAFVREAAQP 421

Query: 392 EQAG-------HVGKALGNRSYFITDTFRQVIFPDRDLILYQSRLGRQAAFSPLLLGLAA 444
            +            KAL   +YFI   F +VI+ +  L     R+ R+      LL + +
Sbjct: 422 YKTSLPLLEGKPQAKAL---AYFIQQAFGRVIYKEAGLAGDNVRVARR---KRQLLWVGS 475

Query: 445 ATGLLFIGWQALSFANNRQWLDSLRGQLAHIEQAADRE-------QQL-AAGKG----LE 492
           + G+L      ++ A+  ++ D + G  A    A  RE       Q+L   G+     L+
Sbjct: 476 SVGVLAF---CVAIASWHRYFD-INGVKAASVLAKSREYSHHEVDQRLDPTGRNLLEPLD 531

Query: 493 VLREQMANVKAHRLQGVPLQLGGGLYQGEAIHQVTRSAYLAQLRSQALEPIARSLQVQMR 552
            +R+ +A    +R    P     GLYQG  I      AYL+ L  + L  +A  +   M 
Sbjct: 532 QIRDAVAVFGDYR-AAWPGVADLGLYQGRTIGPTVDEAYLSLLSRRFLPALASGVIEAMD 590

Query: 553 A 553
           A
Sbjct: 591 A 591



 Score = 57.8 bits (138), Expect = 6e-12
 Identities = 109/557 (19%), Positives = 204/557 (36%), Gaps = 81/557 (14%)

Query: 708  LPRNEQLINETRQNLKSFMISSSLVDREYLRLQLESSRQF-PALSLN-------DLVPQP 759
            LP+  Q ++  +Q L+       L  R Y  L+ ++  Q    L L        D+V Q 
Sbjct: 657  LPQYRQRVSHVQQTLRKV----PLPQRVYAGLKQQAQEQLHTGLDLRHQVGPAFDVVYQL 712

Query: 760  GRALLYGTAGV--PAIYTRQGWDTFVKPELIKLVSGNLRNESDWVLDGEGGD---ALVQK 814
                  G  GV    + T +G+  + +P   +     + ++  W L GE      +   +
Sbjct: 713  SSGSSQGDNGVLLAPMLTAKGFKEYFEPRSQRFTEMAMIDQ--WAL-GERAQLDYSDADQ 769

Query: 815  ANFVREFMTRYKRDYTQAWYKMVSSVGVRHFADLASATRELGLLSDVQNSPVKNLLQAVN 874
            A         Y  DY  +W + +++  V  F DL      L  L+    +P+  LL+ V 
Sbjct: 770  AALNERLRNLYSADYIDSWRRALNAFSVADFRDLDHGVTILEQLAGPA-APLHRLLETVR 828

Query: 875  DNTQWDLPVKQAIPAPGTSRDDGFWSKVTGLFDANDTLPANVAPALPAVDDGSLAKRFEP 934
            DN+    PV   +                          A+ AP+  +++     ++   
Sbjct: 829  DNSSLLSPVNVGV--------------------------ADEAPSPVSINSKPEQQQALV 862

Query: 935  VARVFAENNA----EGADSTIMDRYLAALRKLKVRMNNIQRSQDVGKSSKQLISETLEGQ 990
            + R FA  +A     G   +  D   AA+  +      +Q S D GK++   + +     
Sbjct: 863  IQRAFAGLSAMLHAAGEKPSYYDETHAAIVAVHDYAKAVQGSPDRGKAALHAVHQRFSMT 922

Query: 991  PSEITTVRNYVESSVDTSQDGLSRSLQGLFSLPIQYAWATLRDPAGEQIAKAWAQQIAKP 1050
              +       V +       GL   +              L   A  ++ + W  ++   
Sbjct: 923  GHDPIGTLQRVAT-------GLPEPINHHVRKVAHQTAQVLNVEALRELERRWDAEVYSF 975

Query: 1051 WEQVMAHRYPIAGSSRNEASVKDLQRFVDPDSGL-------LPAFKRNEIGNLAGGEGLG 1103
            ++Q +A RYP    +  +AS++D + F  P+  L       L  F ++ +  L  G    
Sbjct: 976  FQQRLAERYPFVVRAP-DASLEDFEAFFGPNGRLQQFQDQYLKLFLKDNLEALQNGL--- 1031

Query: 1104 VGDGKGPALVNPGMLNSIDKASSVGQVIASLSDRDN-GFEIMLEP---SANFTDIVFTLD 1159
                +G +L+   ++  +++A  + +       R N   +  +EP   SAN    +  LD
Sbjct: 1032 ----QGRSLIRTDVIEQLERADRIRETF--FDQRGNLSVQFSIEPLGLSANQRTSLLDLD 1085

Query: 1160 GQEQHYRNGRSSWNRFAWPGT-STAPGARLDVVTLSGTRVTVFDFPGRWGLLRMNESARV 1218
            GQ   Y +G S      WP T      + L ++  +G   ++ ++ G W + R+     +
Sbjct: 1086 GQLISYTHGPSQITGIVWPNTLGQHVRSNLTLLRQNGNSSSL-EYRGPWSMFRLLSRGAL 1144

Query: 1219 DDLDGIQQRFSWNTASG 1235
            +         S+ T  G
Sbjct: 1145 NGRTATSVDLSFKTGDG 1161