Pairwise Alignments

Query, 1267 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 1206 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  135 bits (340), Expect = 2e-35
 Identities = 158/601 (26%), Positives = 251/601 (41%), Gaps = 75/601 (12%)

Query: 13  LLLPLLWLASLLICWLAAPLVPWLRHHVPEALAIISACFLLVI---------VLR-QYQR 62
           LLL L  L  L+  W   P   W       ++A  S   L+++         VLR +++R
Sbjct: 25  LLLGLGALLMLVAIWWLGPQWTWREQQPLASVAHRSVASLVLVLVPLLCWLGVLRTRFRR 84

Query: 63  IRAEHNLENLLQIEVDRSWNATGEFRDQQVLRERLKHAITMLRTDRSAGGGGKAALSDLP 122
           ++AE       + +V   +    E    Q L   L +A            GG+ AL  LP
Sbjct: 85  LQAERRQALAAEQDVALPFVQAQERALSQGLERYLDNA------------GGRRALYRLP 132

Query: 123 WYLVVGMSAAGKTSLL-------THSGLSASIATANDSESGTQHCDWYFSPDAVMIDTAG 175
           WYLV+G   +GK+S +       T + +  + A    +++      W+ S DAV+ID  G
Sbjct: 133 WYLVLGDEQSGKSSFIDRTDQRFTLTRIDQAQARGRQTQAMAYPVGWWVSDDAVIIDPPG 192

Query: 176 RYLRDD-------QSASEFSA-----------FLRMLRKQRGKAAINGLVLVVSLPELLA 217
            ++           + SE SA            L  L+++R + A+NG++LVV LP LL 
Sbjct: 193 VFISQKPPVGSAANAPSEASAPPGIQARLWEHLLGWLQRKRSQRALNGVLLVVDLPALLH 252

Query: 218 ANSDERNALAAQLVARVEEYAECLDANPPVYLMLSKTDQLPGFSQAFDGLDLHERQQPLG 277
              ++R ALA  L  R+ E +  L A  P+Y++L+K D L GF Q +  L   +R+  LG
Sbjct: 253 GRPEQRVALAHGLRTRLYEVSSQLGARLPLYVVLTKFDLLDGFDQFYSQLPAAKRKSLLG 312

Query: 278 MTFGLSEIRTNGLHAVL---QTRLKKLQAHIRQHVDAQMIALGAEAD-STLLNFPQYFAA 333
            TF L  +  +   A L        +L   +++ V  ++  LG  A    L +       
Sbjct: 313 FTFKLDAV--DAFDAWLDEYDEHYGRLLTQLQEQVIDRLDVLGKTAPCGRLFSLHAQLIG 370

Query: 334 LSGVLEQFLEHFTRGHRGGAPLLLRGLYFTSALQNGQQLGQVYEDVIADEFALQAAYDEQ 393
           L  +L+ FL       R   P L+RG+Y++S +Q G        +  A  +  +    E 
Sbjct: 371 LRPILQAFLRETLASDRFTTPPLVRGVYWSSVVQQGDMRNAFVREA-AQPYTTKLPLREG 429

Query: 394 AGHVGKALGNRSYFITDTFRQVIFPDRDLILYQSRLGRQAAFSPLLLGLAAATGLL---- 449
               GKAL    YFI   FR+VI+ +  L     R+ R       LL + +  G+L    
Sbjct: 430 KAQ-GKAL---VYFIQQAFRRVIYQEAGLAGDNVRVARSKRH---LLWVGSGVGILAFSI 482

Query: 450 -FIGWQALSFANNRQWLDSLRGQLAHIEQAADREQQLAAGKG----LEVLREQMANVKAH 504
               WQ  +  N  +    L     +     D       G+     L+ +R+ +A    +
Sbjct: 483 AVASWQRYADINGAKAASVLAKSQEYSGHEVDMRLD-PTGRNLLAPLDQIRDAVAVFGDY 541

Query: 505 RLQGVPLQLGGGLYQGEAIHQVTRSAYLAQLRSQALEPIARSLQVQMRAFNTFANGINQE 564
           R    P+    GLYQG  I  +   AYL+ L  + L  +A  +   + A N    G  Q+
Sbjct: 542 R-AAWPVVADFGLYQGRNIGPLVDEAYLSLLSKRFLPALASGV---IDAMNAAPPGSEQQ 597

Query: 565 L 565
           +
Sbjct: 598 M 598



 Score = 64.3 bits (155), Expect = 6e-14
 Identities = 118/556 (21%), Positives = 212/556 (38%), Gaps = 79/556 (14%)

Query: 708  LPRNEQLINETRQNLKSFMISSSLVDREYLRLQLESSRQFPA-LSLN-------DLVPQP 759
            LP+  Q ++E +Q L+       L  R Y  L+ +S +Q  A L L        D+V QP
Sbjct: 655  LPQYRQRVSEVQQALRKL----PLPQRVYAGLKQQSYQQLHAGLDLRHQVGPAFDVVYQP 710

Query: 760  GRALLYGTAGV--PAIYTRQGWDTFVKPELIKLVSGNLRNESDWVLDGEGGDALVQKANF 817
                  G   V   A+ T +G+  + +P   +     + ++  W L   G  + +  ++ 
Sbjct: 711  SSGARQGDEDVRLAAMLTAKGFREYFEPHSQRFAEMAMVDQ--WAL---GERSQLDYSDV 765

Query: 818  VREFMTR-----YKRDYTQAWYKMVSSVGVRHFADLASATRELGLLSDVQNSPVKNLLQA 872
             R+ +T      Y  DY  +W + +++  V  F DL      L  L+    +P++ LL  
Sbjct: 766  DRDALTERLYNLYSADYIDSWRRALTAFTVADFRDLDHGVAILEQLTGPA-APLQRLLDT 824

Query: 873  VNDNTQWDLPVKQAIPAPGTSRDDGFWSKVTGLFDANDTLPANVAPALPAVDDGSLAKRF 932
            V DNT    P   A+ A G                  +     VA   P        +R 
Sbjct: 825  VRDNTSLAPPA--AVEASG------------------ELSTLRVATGKPEQQQALAIQR- 863

Query: 933  EPVARVFAENNAEGADSTIMDRYLAALRKLKVRMNNIQRSQDVGKSSKQLISE--TLEGQ 990
               A + A   A G   +  D  L A+  +      +Q S D GK++ Q + +   + GQ
Sbjct: 864  -AFAGLGAMLQATGEKPSYYDETLGAVAAVLDYAKAVQDSPDRGKAALQAVHQRFAMTGQ 922

Query: 991  PSEITTVRNYVESSVDTSQDGLSRSLQGLFSLPIQYAWATLRDPAGEQIAKAWAQQIAKP 1050
               I T++       +     +S  ++ L     Q     L   A  ++ + W   +   
Sbjct: 923  -DPIGTLQRIATGLPEP----ISHQVRKLADQTAQ----VLNVEALRELERRWDADVYSF 973

Query: 1051 WEQVMAHRYPIAGSSRNEASVKDLQRFVDPDSGL-------LPAFKRNEIGNLAGGEGLG 1103
            ++Q +A RYP    +  +AS+ D + F  P   L       L  F ++ +  L   +   
Sbjct: 974  FQQRLAGRYPFVVKAP-DASLDDFEAFFGPKGRLQQFNDRYLKVFLKDNLEALQSAQ--- 1029

Query: 1104 VGDGKGPALVNPGMLNSIDKASSVGQVIASLSDRDNGFEIMLEP---SANFTDIVFTLDG 1160
                 G +L+   ++  ++ A  + +       + +  +  +EP   SAN    +  LDG
Sbjct: 1030 ----HGQSLIRADVIEQLELAERIRETFFDQRGKLS-VQFSIEPLGLSANQRTSLLDLDG 1084

Query: 1161 QEQHYRNGRSSWNRFAWPGT-STAPGARLDVVTLSGTRVTVFDFPGRWGLLRMNESARVD 1219
            Q   Y +G S      WP T      + L ++  +G   ++ ++ G W + R+     ++
Sbjct: 1085 QLIAYTHGPSHITGIVWPNTLGQQVRSNLTLLRQNGNSSSL-EYRGPWSMFRLLSRGALN 1143

Query: 1220 DLDGIQQRFSWNTASG 1235
                     S+ T  G
Sbjct: 1144 GRTATSVDLSFRTGDG 1159