Pairwise Alignments

Query, 180 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 160 a.a., type VI secretion system tube protein Hcp from Erwinia tracheiphila SCR3

 Score =  100 bits (249), Expect = 1e-26
 Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 11/169 (6%)

Query: 9   MAFDAYIQIDGIPGEVLDEKHKDWIEVLGYEYGATQATSATASSSGGASSERVALSDFKI 68
           M+ D +++IDGI  E  D  HK WI +  + +GA Q  +    + GGA   +V   D  +
Sbjct: 1   MSTDLFLKIDGITSESQDSNHKGWIAIESFTWGANQPGNMAVGAGGGAG--KVQYRDLSV 58

Query: 69  RKAVDKASAKLFEHCCTGKHIAKLKLNVNRAGGDKVTYLTIDMEEVVVSSVKFVAGGNQS 128
           +  +DKA+  +  +   GKHI K++L++ +AGG ++ Y  I +E+V++++V F   G  S
Sbjct: 59  QALIDKATPAIMRYVSNGKHIGKVELSICKAGGSQIEYCRITLEDVLITNVIF--NGTTS 116

Query: 129 GEDKAVSDLPVEEISFNFARIKTTYTQQNRTDGQAGGNIVGGWDRTANK 177
                  DL      F  +++KT Y +Q+ + G+ G     GWD  ANK
Sbjct: 117 ------RDLIGVSYQFQASKVKTQYWEQSASGGK-GAETQSGWDIKANK 158