Pairwise Alignments

Query, 180 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 160 a.a., type VI secretion system tube protein Hcp from Erwinia tracheiphila SCR3

 Score =  103 bits (257), Expect = 1e-27
 Identities = 51/169 (30%), Positives = 96/169 (56%), Gaps = 11/169 (6%)

Query: 9   MAFDAYIQIDGIPGEVLDEKHKDWIEVLGYEYGATQATSATASSSGGASSERVALSDFKI 68
           MA D ++++DG+ GE  D  H  W ++  + +GATQ  +      GGA   +V  +D  +
Sbjct: 1   MAIDMFMKVDGVTGESKDSNHTGWTDITSFSWGATQPGNMAVGGGGGAG--KVNFNDLHV 58

Query: 69  RKAVDKASAKLFEHCCTGKHIAKLKLNVNRAGGDKVTYLTIDMEEVVVSSVKFVAGGNQS 128
              +DK+   L ++C +GKH+AK+++++ +AGG +V Y  I +E+V+V++V +   G+ +
Sbjct: 59  NALIDKSVTALLKNCASGKHLAKVEVSICKAGGTQVEYARITLEDVLVTTVNY--NGSDN 116

Query: 129 GEDKAVSDLPVEEISFNFARIKTTYTQQNRTDGQAGGNIVGGWDRTANK 177
           G+   ++       SF  +++K  Y +Q+ + G+ G     GW+   NK
Sbjct: 117 GDTLGMT------YSFQASKVKQQYWEQSSSGGK-GAESSAGWNIKENK 158