Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

Subject, 173 a.a., RNA polymerase sigma70 from Pseudomonas simiae WCS417

 Score = 66.6 bits (161), Expect = 2e-16
 Identities = 41/155 (26%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 9   NLQVQTLYTEHHGWLQGWLGRKLGNACDAADLAHDTFVRLLSRQGNPYFGNEPRALLTHI 68
           ++ ++ L+ +H   L+G+L RK+ +   AADL  ++F+RL  +       N  +  L   
Sbjct: 3   DVDLKGLFLKHADTLRGYLARKVRDPQLAADLVQESFLRLAEKPAGERIDNS-QGYLYRT 61

Query: 69  AKGLVVDRWR---RQDVERAYLEAIAHLPQPEVPSPETRWLILETLYRIDAMLRDMPARV 125
           A  L++D  R   R+  +    EA+A + + EV   E + +  +    +   L ++P R 
Sbjct: 62  ASNLLIDHIRQEARRKTDAVPHEALAEI-EDEVAGLEAQAMAQQQRQALKQALAELPERT 120

Query: 126 RQVFLLSQLDGLTYAQIAEQLQVSLITIKRDMRTA 160
           +Q+F L++++G+T+AQ+A  L +S  ++++ +  A
Sbjct: 121 QQIFRLNRIEGMTHAQVARHLDISDSSVQKHLAKA 155