Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

Subject, 162 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  152 bits (383), Expect = 3e-42
 Identities = 76/153 (49%), Positives = 107/153 (69%), Gaps = 1/153 (0%)

Query: 12  VQTLYTEHHGWLQGWLGRKLGNACDAADLAHDTFVRLLSRQGNPYFGNEPRALLTHIAKG 71
           V+ LY +HH WL GWL RKLG    AADLA DTF+R+L+ +  P    EPRA LT +AK 
Sbjct: 7   VEVLYNDHHHWLTGWLRRKLGCPESAADLAQDTFMRVLTAREAPTL-IEPRAFLTTVAKR 65

Query: 72  LVVDRWRRQDVERAYLEAIAHLPQPEVPSPETRWLILETLYRIDAMLRDMPARVRQVFLL 131
           ++ + +RRQD+ERAYL+A+A +P+   PS E R +IL+TL  +D +L  +P +V++ FLL
Sbjct: 66  VLFNFYRRQDLERAYLDALAQMPEHVAPSEEERAIILQTLVELDQLLDGLPVQVKRAFLL 125

Query: 132 SQLDGLTYAQIAEQLQVSLITIKRDMRTAFLAC 164
           +Q DGLTYAQI  +L +S+ T+KR +  A + C
Sbjct: 126 AQCDGLTYAQIGAELGISIATVKRHLSKAAMRC 158