Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

Subject, 191 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 62.0 bits (149), Expect = 6e-15
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 3/143 (2%)

Query: 23  LQGWLGRKLGNACDAADLAHDTFVRLLSRQGNPYFGNEPRALLTHIAKGLVVDRWRRQDV 82
           ++  + R++G    A+DL  + F+R   R        +    L   A  L +D  R +  
Sbjct: 32  MEALVSRRVGCRATASDLVQELFLRFWRRPEVKVEALD--TYLLRCAGNLAIDHLRSESS 89

Query: 83  ERAYLEAIAHLPQPEVP-SPETRWLILETLYRIDAMLRDMPARVRQVFLLSQLDGLTYAQ 141
                EA   + +  +  +PE    +   L RI+A LR +P R RQ+FLL+++ G  Y++
Sbjct: 90  RERVAEAAVPVSEASLAQAPEQAVEVDHDLQRIEATLRALPERTRQIFLLNRIHGCKYSE 149

Query: 142 IAEQLQVSLITIKRDMRTAFLAC 164
           IA+ +Q+S   +++ M  A  AC
Sbjct: 150 IAKAMQLSQSAVEKHMMRALEAC 172