Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 65.1 bits (157), Expect = 5e-16
 Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 23  LQGWLGRKLGNACDAADLAHDTFVRLLSRQGNPYFGNEPRALLTHIAKGLVVDRWRRQDV 82
           L  +L  +LG+   A D+AHD ++R+L R G+      PRA L   A  LVVDR RRQ V
Sbjct: 8   LVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQI-EHPRAFLYRTALNLVVDRHRRQLV 66

Query: 83  ERAY----LEAIAHLPQPEVPSPETRWLILETLYRIDAMLRDMPARVRQVFLLSQLDGLT 138
            +A     L+A + L   E+   +    + + L  +   L ++    R  FLL +++GL+
Sbjct: 67  RQAEPLDALDADSRLHSSEL---QHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGLS 123

Query: 139 YAQIAEQLQVSLITIKRDMRTAFLAC 164
           + QIAE+L +S   +++ +  A   C
Sbjct: 124 HQQIAERLGISRSLVEKHIVNAMKHC 149