Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  155 bits (393), Expect = 3e-43
 Identities = 81/155 (52%), Positives = 113/155 (72%), Gaps = 3/155 (1%)

Query: 11  QVQTLYTEHHGWLQGWLGRKLGNACDAADLAHDTFVRLL-SRQGNPYFGNEPRALLTHIA 69
           +V  LY  HH WL+GWL  ++G +  AADLA DTFVRLL +RQ +P    EPRA L+ IA
Sbjct: 11  EVALLYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPL--KEPRAYLSSIA 68

Query: 70  KGLVVDRWRRQDVERAYLEAIAHLPQPEVPSPETRWLILETLYRIDAMLRDMPARVRQVF 129
           +GL++D++RR+ +ERAY E +AHLP+ EVPS E + +IL++L R+D  L+ +  RVRQ F
Sbjct: 69  RGLMIDQFRRRALERAYQEGLAHLPEAEVPSEEDKLVILDSLERLDRALQQLKPRVRQAF 128

Query: 130 LLSQLDGLTYAQIAEQLQVSLITIKRDMRTAFLAC 164
           LL+QLDGL+  Q+A++L VS  T++RD+  A  AC
Sbjct: 129 LLAQLDGLSIVQVAQRLGVSRATVERDLAKALGAC 163