Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

Subject, 173 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  167 bits (424), Expect = 7e-47
 Identities = 88/163 (53%), Positives = 114/163 (69%), Gaps = 2/163 (1%)

Query: 2   PPAEPSLNLQVQTLYTEHHGWLQGWLGRKLGNACDAADLAHDTFVRLLSRQGNPYFGNEP 61
           P + PS N  VQTLY++HHGWL  WL  KLGNA DAADLA DTFVRLL R+      N P
Sbjct: 4   PSSMPS-NDSVQTLYSDHHGWLHTWLRSKLGNAADAADLAQDTFVRLLQRREQLQL-NAP 61

Query: 62  RALLTHIAKGLVVDRWRRQDVERAYLEAIAHLPQPEVPSPETRWLILETLYRIDAMLRDM 121
           RA L  +A+GLV+D WRR+++ RAYLEA+AH+P+  VPS ETR L+LE L RI  ML  +
Sbjct: 62  RAFLRTVARGLVIDHWRREELHRAYLEALAHVPEALVPSVETRELLLELLERIARMLDGL 121

Query: 122 PARVRQVFLLSQLDGLTYAQIAEQLQVSLITIKRDMRTAFLAC 164
             +VR+ FLL+Q +GL +  IAEQ+ +S+ T++R +  A   C
Sbjct: 122 KPKVRRAFLLAQCEGLKHQAIAEQMGISVRTVERYIANALYHC 164