Pairwise Alignments

Query, 352 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 336 a.a., dipeptide ABC transporter, permease component (from data) from Pseudomonas simiae WCS417

 Score =  162 bits (410), Expect = 1e-44
 Identities = 114/360 (31%), Positives = 176/360 (48%), Gaps = 43/360 (11%)

Query: 1   MTAYILRRLLLIIPTLLAILLVNFAIVQAAPGGPVEQAVARLQGLGGGAPGARAEVVHGE 60
           M ++I RRL L+IPT   I L+ FA+++  PG PVE                   V+ GE
Sbjct: 1   MFSFIARRLGLLIPTFFGITLLTFALIRMIPGDPVE-------------------VMMGE 41

Query: 61  SRATRGLDPKLIEEIKRQYGFDKSAPERLWLMLGQYARLDFGNSFFRGAKVTDLILDKLP 120
            R    +DP++  +   + G +K    +    +G+ A+ D G S      V        P
Sbjct: 42  RR----VDPEMHAQAMERLGLNKPLYAQYLDYVGKLAQGDLGESLRTRTSVWTEFTALFP 97

Query: 121 VTLSLGFWATLITYLVSIPLGIRKAMRHGSRFDAWSSALIVIGYALPSFLFALLLIVLFA 180
            TL L   A L   ++ +  G+  A++ GS FD     + + GY++P F + L+LI+ F+
Sbjct: 98  ATLELSMAALLFAGILGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFS 157

Query: 181 GGTSLNWFPVRGLVSDNFDEL---------SLLGKVADYFW----HLVLPVAALVIGGFA 227
              SL W PV G +   +D           +LL    D FW    HL+LP   L     A
Sbjct: 158 --VSLGWTPVSGRIDLLYDIEPRTGFMLIDTLLADEPDAFWDALHHLILPAIVLGTIPLA 215

Query: 228 TLTLLTKNAFLDEVSRQYVVTARAKGLSERRVLYGHVLRNAML--LVVAGLPQALITVFF 285
            +  +T+++ L+ +   Y+ TA+AKGLS  RV++ H LRNA++  L V GL    +    
Sbjct: 216 VIARMTRSSMLEVLREDYIRTAKAKGLSPARVVFVHGLRNALIPVLTVVGLQ---VGTLL 272

Query: 286 AGSLLIEVIFSLDGLGRMSYEAAVSRDYPVVFGTLFIFTLAGLLIRLIGDLSYTLLDPRI 345
           AG++L E IFS  G+G+   EA  +RDYPVV   + +     +L+  + D+ Y   +PRI
Sbjct: 273 AGAVLTETIFSWPGIGKWLIEAIGARDYPVVQNGILLIACLVILVNFVVDILYGFANPRI 332