Pairwise Alignments

Query, 352 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 334 a.a., Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  171 bits (433), Expect = 2e-47
 Identities = 117/358 (32%), Positives = 177/358 (49%), Gaps = 39/358 (10%)

Query: 1   MTAYILRRLLLIIPTLLAILLVNFAIVQAAPGGPVEQAVARLQGLGGGAPGARAEVVHGE 60
           M  +IL R+ L++PT + + L+ F +++  PG P+E                    + GE
Sbjct: 1   MFRFILTRVSLLVPTFIGMTLLAFFLIRLVPGDPIE-------------------TMAGE 41

Query: 61  SRATRGLDPKLIEEIKRQYGFDKSAPERLWLMLGQYARLDFGNSFFRGAKVTDLILDKLP 120
               RG+DP    E++  YGFDK    +  + +G+    D G S      V    L   P
Sbjct: 42  ----RGIDPARHAELRTAYGFDKPVIVQYGIYIGRVLHGDLGKSIITQDTVMSEFLALFP 97

Query: 121 VTLSLGFWATLITYLVSIPLGIRKAMRHGSRFDAWSSALIVIGYALPSFLFALLLIVLFA 180
            T+ L   A L   L+ +P GI  A+R  S FD    A  + GY++P F + LLLI+ F+
Sbjct: 98  ATVELAVCAILFALLLGLPAGILAAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFS 157

Query: 181 GGTSLNWFPVRGLVSDNF---DEL------SLLGKVADYFW----HLVLPVAALVIGGFA 227
               L W PV G ++  +    E       SL       FW    HL+LP   L     A
Sbjct: 158 --VQLGWTPVSGRIAVQYYIEPETGFLLIDSLRAGDTGAFWSALHHLILPAVVLGTVPLA 215

Query: 228 TLTLLTKNAFLDEVSRQYVVTARAKGLSERRVLYGHVLRNAMLLVVAGLPQALITVFFAG 287
            +  +T++A L+ +   Y+ TARAKGLS  RV+  H LRNA++ VV  +    + V F G
Sbjct: 216 VIARMTRSAMLEVLGEDYIRTARAKGLSRLRVVGLHALRNALIPVVTVI-GLQVGVLFTG 274

Query: 288 SLLIEVIFSLDGLGRMSYEAAVSRDYPVVFGTLFIFTLAGLLIRLIGDLSYTLLDPRI 345
           ++L E IFS  G+G+   EA   RDYPV+ G + +     +L+ L+ D++Y +++PRI
Sbjct: 275 AILTETIFSWPGVGKWLIEAIGRRDYPVLQGGMLLLGGIVMLVNLLVDVAYGVINPRI 332