Pairwise Alignments

Query, 352 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 313 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  160 bits (405), Expect = 4e-44
 Identities = 111/349 (31%), Positives = 171/349 (48%), Gaps = 38/349 (10%)

Query: 1   MTAYILRRLLLIIPTLLAILLVNFAIVQAAPGGPVEQAVARLQGLGGGAPGARAEVVHGE 60
           M  ++ +RLL  +P LL + +  F IV+  PG P                   A V+ G 
Sbjct: 1   MLTFLGKRLLATLPVLLVVAVAIFMIVRLTPGDP-------------------AAVIGGN 41

Query: 61  SRATRGLDPKLIEEIKRQYGFDKSAPERLWLMLGQYARLDFGNSFFRGAKVTDLILDKLP 120
           S     LD      I+ Q G  +   E+  +        D G SFF    VT+LI  ++ 
Sbjct: 42  SATNEDLD-----RIRVQLGLTRPLWEQFAIWCNGVLHGDLGFSFFLNKPVTELIGQRME 96

Query: 121 VTLSLGFWATLITYLVSIPLGIRKAMRHGSRFDAWSSALIVIGYALPSFLFALLLIVLFA 180
            TLSL     L+   +++PLG   A R G   D    A  V G+++P F+   +LI L A
Sbjct: 97  PTLSLAGGTLLLAVAIALPLGTLAAWRMGGWLDKAVMAFSVAGFSVPVFVVGYVLIYLLA 156

Query: 181 GGTSLNWFPVRGLVSDNFDELSLLGKVADYFWHLVLPVAALVIGGFATLTLLTKNAFLDE 240
               L WFPV+G          +   V  +   LVLP   L I   A L+ +T+ A  + 
Sbjct: 157 --MKLQWFPVQGY-------RRIADGVGPWLHQLVLPCLTLAITYVALLSRVTRAAVSEA 207

Query: 241 VSRQYVVTARAKGLSERRVLYGHVLRNAMLLVVA--GLPQALITVFFAGSLLIEVIFSLD 298
           ++  ++ TARAKG++E  VL  H LRNA + VV   G+  AL+     G ++ E +F++ 
Sbjct: 208 LTEDFIRTARAKGITELEVLKHHALRNAAVPVVTVIGVSAALL---LGGVVVTETVFAIP 264

Query: 299 GLGRMSYEAAVSRDYPVVFGTLFIFTLAGLLIRLIGDLSYTLLDPRIDF 347
           GLG+++ +A ++RD+PV+ G +  F +  + + L+ DLSY  +DPRI +
Sbjct: 265 GLGQLTVDAVLNRDFPVLQGVVLFFAVVYVAVNLLVDLSYLFIDPRIRY 313