Pairwise Alignments

Query, 352 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  168 bits (425), Expect = 2e-46
 Identities = 118/360 (32%), Positives = 178/360 (49%), Gaps = 43/360 (11%)

Query: 1   MTAYILRRLLLIIPTLLAILLVNFAIVQAAPGGPVEQAVARLQGLGGGAPGARAEVVHGE 60
           M ++I RRL L+IPT   I L+ FA+++  PG PVE                   V+ GE
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVE-------------------VMMGE 41

Query: 61  SRATRGLDPKLIEEIKRQYGFDKSAPERLWLMLGQYARLDFGNSFFRGAKVTDLILDKLP 120
            R    +DP++  +   + G +K  P +    +G+ A+ D G S      V    L   P
Sbjct: 42  RR----VDPEMHAQAMERLGLNKPLPVQYLDYVGKLAQGDLGESLRTRESVWREFLTLFP 97

Query: 121 VTLSLGFWATLITYLVSIPLGIRKAMRHGSRFDAWSSALIVIGYALPSFLFALLLIVLFA 180
            TL L F A L   +V +  G+  A++ GS FD     + + GY++P F + L+LI+ F+
Sbjct: 98  ATLELAFAALLFAGVVGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFS 157

Query: 181 GGTSLNWFPVRGLVSDNFD-----ELSLL--------GKVADYFWHLVLPVAALVIGGFA 227
              SL W PV G +   +D        L+        G   D   HL+LP   L     A
Sbjct: 158 --VSLGWTPVSGRIDLLYDIEPKTGFMLIDTLLSDEEGAFKDAVMHLILPAIVLGTIPLA 215

Query: 228 TLTLLTKNAFLDEVSRQYVVTARAKGLSERRVLYGHVLRNAML--LVVAGLPQALITVFF 285
            +  +T+++ L+ +   Y+ TARAKGLS  RV++ H LRNA++  L V GL    +    
Sbjct: 216 VIARMTRSSMLEVLREDYIRTARAKGLSPARVVFVHGLRNALIPVLTVFGLQ---VGTLL 272

Query: 286 AGSLLIEVIFSLDGLGRMSYEAAVSRDYPVVFGTLFIFTLAGLLIRLIGDLSYTLLDPRI 345
           AG++L E IFS  G+G+   EA  +RDYPVV   + +     +L+  + D+ Y L +PRI
Sbjct: 273 AGAVLTETIFSWPGIGKWLIEAIGARDYPVVQNGILLIACLVILVNFVVDILYGLANPRI 332