Pairwise Alignments

Query, 352 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 315 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  160 bits (406), Expect = 3e-44
 Identities = 110/345 (31%), Positives = 172/345 (49%), Gaps = 34/345 (9%)

Query: 1   MTAYILRRLLLIIPTLLAILLVNFAIVQAAPGGPVEQAVARLQGLGGGAPGARAEVVHGE 60
           M  YI +RLL+ IPTLL I +  F++ +  PG PV                     + GE
Sbjct: 1   MPVYIGKRLLVAIPTLLIISIFVFSLQKLLPGDPVL-------------------AMAGE 41

Query: 61  SRATRGLDPKLIEEIKRQYGFDKSAPERLWLMLGQYARLDFGNSFFRGAKVTDLILDKLP 120
            R     DP  IE ++ +Y  +   P +    LG     DFG S      V +LI  KLP
Sbjct: 42  ER-----DPATIEFLREKYRLNDPVPLQYLNWLGGVVTGDFGISLRTNQPVLELIGQKLP 96

Query: 121 VTLSLGFWATLITYLVSIPLGIRKAMRHGSRFDAWSSALIVIGYALPSFLFALLLIVLFA 180
           VT+ L   A     ++ IP+GI  A++  +  D  ++ + + G ++P+F   ++LI+L +
Sbjct: 97  VTIQLAVMAMFFAMVIGIPIGILAAVKKNTWIDYTANIVALSGLSIPNFWLGIMLILLVS 156

Query: 181 GGTSLNWFPVRGLVSDNFDELSLLGKVADYFWHLVLPVAALVIGGFATLTLLTKNAFLDE 240
               L W P  G  S   D +  +         +++P   L     ATL   T++A +  
Sbjct: 157 --VKLGWLPASGYESIFVDPVRSIET-------MIMPAFVLGNALAATLMRHTRSAMVAV 207

Query: 241 VSRQYVVTARAKGLSERRVLYGHVLRNAMLLVVAGLPQALITVFFAGSLLIEVIFSLDGL 300
           +S  Y+ TARAKGLS R ++  H  RNA+L V+  L   L     AG++L E IF++ G 
Sbjct: 208 LSSDYIRTARAKGLSPREIILSHSFRNALLPVIT-LLALLFGELLAGAVLTEQIFTIPGF 266

Query: 301 GRMSYEAAVSRDYPVVFGTLFIFTLAGLLIRLIGDLSYTLLDPRI 345
           G+M+ +A  +RDY VV G +    +  +L+ L+ D++Y LL+PR+
Sbjct: 267 GKMTVDAVFTRDYAVVQGIVLCTAVGFILMNLLADIAYVLLNPRL 311