Pairwise Alignments

Query, 352 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 316 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  166 bits (421), Expect = 6e-46
 Identities = 110/345 (31%), Positives = 175/345 (50%), Gaps = 34/345 (9%)

Query: 1   MTAYILRRLLLIIPTLLAILLVNFAIVQAAPGGPVEQAVARLQGLGGGAPGARAEVVHGE 60
           M A ++RRL+ +I TL A+ L+ + ++   PG P                   A ++ G 
Sbjct: 1   MLAVLIRRLVSLIITLFAVSLIIYVVMGLLPGDP-------------------AAIMLGT 41

Query: 61  SRATRGLDPKLIEEIKRQYGFDKSAPERLWLMLGQYARLDFGNSFFRGAKVTDLILDKLP 120
           S +     P  +  +++Q G D+  P R    L    R D G S+  G  V  LI+++L 
Sbjct: 42  SAS-----PDTLAALQKQMGLDQPLPLRYLHWLAGVFRGDLGQSYTYGVPVAGLIIERLA 96

Query: 121 VTLSLGFWATLITYLVSIPLGIRKAMRHGSRFDAWSSALIVIGYALPSFLFALLLIVLFA 180
           VTL L   A  ++  ++IPLG+  A       D  +     +G A+P F   LLLI++F+
Sbjct: 97  VTLPLALLAIFLSVTIAIPLGVAAAQNRNGALDFAAGLFSHVGIAVPGFWVGLLLIIVFS 156

Query: 181 GGTSLNWFPVRGLVSDNFDELSLLGKVADYFWHLVLPVAALVIGGFATLTLLTKNAFLDE 240
             T+L W P  G     +      G VA     LVLP  AL +     LT + ++A L+ 
Sbjct: 157 --TTLGWMPSGGF--PGWSPSFSAGLVA-----LVLPAIALALSQAGVLTRVCRSAVLEV 207

Query: 241 VSRQYVVTARAKGLSERRVLYGHVLRNAMLLVVAGLPQALITVFFAGSLLIEVIFSLDGL 300
           ++  +V TARAKGLSER  L+ H + NAM+ VV  +     T   AG++L+E +F+L GL
Sbjct: 208 MNEDFVRTARAKGLSERVALWRHAVPNAMIPVVT-MIGLQFTFLIAGAVLVENVFNLPGL 266

Query: 301 GRMSYEAAVSRDYPVVFGTLFIFTLAGLLIRLIGDLSYTLLDPRI 345
           GR++Y+A   RD  V+   +  F+   +++  + D++Y  +DPR+
Sbjct: 267 GRLAYQALTQRDIVVMQSVVLFFSALVIIMNFVVDIAYLFIDPRL 311